Hello Thierry,

The version is: slapi-nis-0.56.0-8.el7.x86_64

And the errors are:
[02/May/2018:13:04:30.089731032 +0200] - ERR - schema-compat-plugin - group 
"[email protected]" does not exist because SSSD is offline.
[02/May/2018:13:04:30.093169411 +0200] - ERR - schema-compat-plugin - waiting 
for SSSD to become online...

SSSD service is up, but as the ipa services are not (all) running, the ipa 
domain is down, logs when started sssd shows:
sssd[be[ipa.example.org]][823]: Backend is offline

and logs sssd_nss.log & sssd_sudo.log have hundreds of:
 [sss_dp_get_reply] (0x0010): The Data Provider returned an error 
[org.freedesktop.sssd.Error.DataProvider.Offline]

Thanks & Regards.

-----Original Message-----
From: thierry bordaz <[email protected]> 
Sent: Thursday, May 03, 2018 11:25
To: SOLER SANGUESA Miguel <[email protected]>; Rob Crittenden 
<[email protected]>; FreeIPA users list <[email protected]>
Cc: Ludwig Krispenz <[email protected]>
Subject: Re: [Freeipa-users] Re: Problem on dirsrv when updating from 4.5.0 
(RHEL 7.4) to 4.5.4 (RHEL 7.5)

me again ...

If it exists some logs (/var/log/dirsrv/slapd-<xx>/errors) during the hanging 
period it could also indicate the reason what Schema compat was waiting for 
(SSSD ?)

On 05/03/2018 10:38 AM, SOLER SANGUESA Miguel wrote:
> hello,
>
> Yesterday my ssh console closed the connection, so I had to start again the 
> "ipa-server-upgrade", but the result is more or less the same:
> # ipa-server-upgrade
> Upgrading IPA:. Estimated time: 1 minute 30 seconds
>    [1/10]: stopping directory server
>    [2/10]: saving configuration
>    [3/10]: disabling listeners
>    [4/10]: enabling DS global lock
>    [5/10]: starting directory server
>    [6/10]: updating schema
>    [7/10]: upgrading server
>
> But now, the lines that are repeated on the access log are:
> [03/May/2018:10:33:27.969889221 +0200] conn=6 op=79094 SRCH 
> base="cn=indextask_l_137445500911864330_4055,cn=index,cn=tasks,cn=config" 
> scope=0 filter="(objectClass=*)" attrs="nstaskstatus nstaskexitcode"
> [03/May/2018:10:33:27.970146545 +0200] conn=6 op=79094 RESULT err=0 
> tag=101 nentries=1 etime=1.0000687740
>
> And it is on the same state than the other:
> # ldapsearch -H ldapi://%2fvar%2frun%2fslapd-IPA-EXAMPLE-ORG.socket -b 
> cn=indextask_l_137445500911864330_4055,cn=index,cn=tasks,cn=config -s 
> base SASL/EXTERNAL authentication started SASL username: 
> gidNumber=0+uidNumber=0,cn=peercred,cn=external,cn=auth
> SASL SSF: 0
> # extended LDIF
> #
> # LDAPv3
> # base 
> <cn=indextask_l_137445500911864330_4055,cn=index,cn=tasks,cn=config> 
> with scope baseObject # filter: (objectclass=*) # requesting: ALL #
>
> # indextask_l_137445500911864330_4055, index, tasks, config
> dn: cn=indextask_l_137445500911864330_4055,cn=index,cn=tasks,cn=config
> objectClass: top
> objectClass: extensibleObject
> nsindexattribute: l
> nsinstance: userRoot
> cn: indextask_l_137445500911864330_4055
> nstaskcurrentitem: 0
> nstasktotalitems: 1
>
> # search result
> search: 3
> result: 0 Success
>
> # numResponses: 2
> # numEntries: 1
>
> The pstack of the proces: /usr/bin/python2 
> /usr/sbin/ipa-server-upgrade # pstack 9805
> #0  0x00007fb906629be3 in __select_nocancel () from /lib64/libc.so.6
> #1  0x00007fb8ff5e0000 in time_sleep () from 
> /usr/lib64/python2.7/lib-dynload/timemodule.so
> #2  0x00007fb90730acf0 in PyEval_EvalFrameEx () from 
> /lib64/libpython2.7.so.1.0
> #3  0x00007fb90730a6bd in PyEval_EvalFrameEx () from 
> /lib64/libpython2.7.so.1.0
> #4  0x00007fb90730a6bd in PyEval_EvalFrameEx () from 
> /lib64/libpython2.7.so.1.0
> #5  0x00007fb90730a6bd in PyEval_EvalFrameEx () from 
> /lib64/libpython2.7.so.1.0
> #6  0x00007fb90730d03d in PyEval_EvalCodeEx () from 
> /lib64/libpython2.7.so.1.0
> #7  0x00007fb90730a53c in PyEval_EvalFrameEx () from 
> /lib64/libpython2.7.so.1.0
> #8  0x00007fb90730a6bd in PyEval_EvalFrameEx () from 
> /lib64/libpython2.7.so.1.0
> #9  0x00007fb90730d03d in PyEval_EvalCodeEx () from 
> /lib64/libpython2.7.so.1.0
> #10 0x00007fb90730a53c in PyEval_EvalFrameEx () from 
> /lib64/libpython2.7.so.1.0
> #11 0x00007fb90730d03d in PyEval_EvalCodeEx () from 
> /lib64/libpython2.7.so.1.0
> #12 0x00007fb90730a53c in PyEval_EvalFrameEx () from 
> /lib64/libpython2.7.so.1.0
> #13 0x00007fb90730a6bd in PyEval_EvalFrameEx () from 
> /lib64/libpython2.7.so.1.0
> #14 0x00007fb90730d03d in PyEval_EvalCodeEx () from 
> /lib64/libpython2.7.so.1.0
> #15 0x00007fb90730a53c in PyEval_EvalFrameEx () from 
> /lib64/libpython2.7.so.1.0
> #16 0x00007fb90730a6bd in PyEval_EvalFrameEx () from 
> /lib64/libpython2.7.so.1.0
> #17 0x00007fb90730a6bd in PyEval_EvalFrameEx () from 
> /lib64/libpython2.7.so.1.0
> #18 0x00007fb90730a6bd in PyEval_EvalFrameEx () from 
> /lib64/libpython2.7.so.1.0
> #19 0x00007fb90730a6bd in PyEval_EvalFrameEx () from 
> /lib64/libpython2.7.so.1.0
> #20 0x00007fb90730d03d in PyEval_EvalCodeEx () from 
> /lib64/libpython2.7.so.1.0
> #21 0x00007fb90730d142 in PyEval_EvalCode () from 
> /lib64/libpython2.7.so.1.0
> #22 0x00007fb90732657f in run_mod () from /lib64/libpython2.7.so.1.0
> #23 0x00007fb90732773e in PyRun_FileExFlags () from 
> /lib64/libpython2.7.so.1.0
> #24 0x00007fb9073289c9 in PyRun_SimpleFileExFlags () from 
> /lib64/libpython2.7.so.1.0
> #25 0x00007fb907339b7f in Py_Main () from /lib64/libpython2.7.so.1.0
> #26 0x00007fb9065563d5 in __libc_start_main () from /lib64/libc.so.6
> #27 0x000000000040066e in _start ()
>
>
> And the pstack from the process: /usr/sbin/ns-slapd -D 
> /etc/dirsrv/slapd-IPA-EXAMPLE-ORG -i 
> /var/run/dirsrv/slapd-IPA-EXAMPLE-ORG.pid
> # pstack 15536
> Thread 50 (Thread 0x7f5bc0ae9700 (LWP 15539)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 49 
> (Thread 0x7f5bc02e8700 (LWP 15540)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 48 
> (Thread 0x7f5bbfae7700 (LWP 15541)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 47 
> (Thread 0x7f5bbf2e6700 (LWP 15542)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 46 
> (Thread 0x7f5bbeae5700 (LWP 15543)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 45 
> (Thread 0x7f5bbe2e4700 (LWP 15544)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 44 
> (Thread 0x7f5bbdae3700 (LWP 15545)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 43 
> (Thread 0x7f5bbd2e2700 (LWP 15546)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 42 
> (Thread 0x7f5bbcae1700 (LWP 15547)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 41 
> (Thread 0x7f5bbc2e0700 (LWP 15548)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 40 
> (Thread 0x7f5bbbadf700 (LWP 15549)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 39 
> (Thread 0x7f5bbb2de700 (LWP 15550)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 38 
> (Thread 0x7f5bbaadd700 (LWP 15551)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 37 
> (Thread 0x7f5bba2dc700 (LWP 15552)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 36 
> (Thread 0x7f5bb9adb700 (LWP 15553)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 35 
> (Thread 0x7f5bb92da700 (LWP 15554)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4d33e63 in worker_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 34 
> (Thread 0x7f5bb8ad9700 (LWP 15555)):
> #0  0x00007f5bd18a6113 in epoll_wait () at /lib64/libc.so.6
> #1  0x00007f5bd1d9c803 in epoll_dispatch () at 
> /lib64/libevent-2.0.so.5
> #2  0x00007f5bd1d883ea in event_base_loop () at 
> /lib64/libevent-2.0.so.5
> #3  0x00007f5bd4d34eae in ns_event_fw_loop () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #4  0x00007f5bd4d33ac9 in event_loop_thread_func () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 33 
> (Thread 0x7f5bb2b84700 (LWP 15559)):
> #0  0x00007f5bd189cc03 in select () at /lib64/libc.so.6
> #1  0x00007f5bd4acc599 in DS_Sleep () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #2  0x00007f5bc3e41e77 in deadlock_threadmain () at 
> /usr/lib64/dirsrv/plugins/libback-ldbm.so
> #3  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #4  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #5  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 32 
> (Thread 0x7f5bb2383700 (LWP 15560)):
> #0  0x00007f5bd189cc03 in select () at /lib64/libc.so.6
> #1  0x00007f5bd4acc599 in DS_Sleep () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #2  0x00007f5bc3e45a87 in checkpoint_threadmain () at 
> /usr/lib64/dirsrv/plugins/libback-ldbm.so
> #3  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #4  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #5  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 31 
> (Thread 0x7f5bb1b82700 (LWP 15561)):
> #0  0x00007f5bd189cc03 in select () at /lib64/libc.so.6
> #1  0x00007f5bd4acc599 in DS_Sleep () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #2  0x00007f5bc3e420c7 in trickle_threadmain () at 
> /usr/lib64/dirsrv/plugins/libback-ldbm.so
> #3  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #4  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #5  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 30 
> (Thread 0x7f5bb1381700 (LWP 15562)):
> #0  0x00007f5bd189cc03 in select () at /lib64/libc.so.6
> #1  0x00007f5bd4acc599 in DS_Sleep () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #2  0x00007f5bc3e3ce47 in perf_threadmain () at 
> /usr/lib64/dirsrv/plugins/libback-ldbm.so
> #3  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #4  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #5  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 29 
> (Thread 0x7f5bb0b80700 (LWP 15563)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x00007f5bd4ab8eb8 in slapi_wait_condvar () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #3  0x00007f5bc920213e in cos_cache_wait_on_change () at 
> /usr/lib64/dirsrv/plugins/libcos-plugin.so
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 28 
> (Thread 0x7f5bb037f700 (LWP 15564)):
> #0  0x00007f5bd189ae9d in poll () at /lib64/libc.so.6
> #1  0x00007f5bc6d7e44c in ipa_cldap_worker () at 
> /usr/lib64/dirsrv/plugins/libipa_cldap.so
> #2  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #3  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 27 
> (Thread 0x7f5bd5132700 (LWP 15566)):
> #0  0x00007f5bd21fccf2 in pthread_cond_timedwait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2852d27 in pt_TimedWait () at /lib64/libnspr4.so
> #2  0x00007f5bd285320e in PR_WaitCondVar () at /lib64/libnspr4.so
> #3  0x00007f5bc3572033 in _cl5TrimMain () at 
> /usr/lib64/dirsrv/plugins/libreplication-plugin.so
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 26 
> (Thread 0x7f5bafb7e700 (LWP 15567)):
> #0  0x00007f5bd21fccf2 in pthread_cond_timedwait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2852d27 in pt_TimedWait () at /lib64/libnspr4.so
> #2  0x00007f5bd285320e in PR_WaitCondVar () at /lib64/libnspr4.so
> #3  0x00007f5bc3587fa4 in protocol_sleep () at 
> /usr/lib64/dirsrv/plugins/libreplication-plugin.so
> #4  0x00007f5bc358b75a in repl5_inc_run () at 
> /usr/lib64/dirsrv/plugins/libreplication-plugin.so
> #5  0x00007f5bc358fbec in prot_thread_main () at 
> /usr/lib64/dirsrv/plugins/libreplication-plugin.so
> #6  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #7  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #8  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 25 
> (Thread 0x7f5baf37d700 (LWP 15568)):
> #0  0x00007f5bd21fccf2 in pthread_cond_timedwait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2852d27 in pt_TimedWait () at /lib64/libnspr4.so
> #2  0x00007f5bd285320e in PR_WaitCondVar () at /lib64/libnspr4.so
> #3  0x00007f5bc3587fa4 in protocol_sleep () at 
> /usr/lib64/dirsrv/plugins/libreplication-plugin.so
> #4  0x00007f5bc358b75a in repl5_inc_run () at 
> /usr/lib64/dirsrv/plugins/libreplication-plugin.so
> #5  0x00007f5bc358fbec in prot_thread_main () at 
> /usr/lib64/dirsrv/plugins/libreplication-plugin.so
> #6  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #7  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #8  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 24 
> (Thread 0x7f5bae759700 (LWP 15569)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x00007f5bd4ab8eb8 in slapi_wait_condvar () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #3  0x00007f5bc22d11ad in roles_cache_wait_on_change () at 
> /usr/lib64/dirsrv/plugins/libroles-plugin.so
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 23 
> (Thread 0x7f5badf58700 (LWP 15570)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x00007f5bd4ab8eb8 in slapi_wait_condvar () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #3  0x00007f5bc22d11ad in roles_cache_wait_on_change () at 
> /usr/lib64/dirsrv/plugins/libroles-plugin.so
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 22 
> (Thread 0x7f5bad757700 (LWP 15571)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x00007f5bd4ab8eb8 in slapi_wait_condvar () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #3  0x00007f5bc22d11ad in roles_cache_wait_on_change () at 
> /usr/lib64/dirsrv/plugins/libroles-plugin.so
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 21 
> (Thread 0x7f5bacd4f700 (LWP 15572)):
> #0  0x00007f5bd21fccf2 in pthread_cond_timedwait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2852d27 in pt_TimedWait () at /lib64/libnspr4.so
> #2  0x00007f5bd285320e in PR_WaitCondVar () at /lib64/libnspr4.so
> #3  0x0000564591e10b08 in housecleaning ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 20 
> (Thread 0x7f5bac54e700 (LWP 15573)):
> #0  0x00007f5bd21fccf2 in pthread_cond_timedwait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2852d27 in pt_TimedWait () at /lib64/libnspr4.so
> #2  0x00007f5bd285320e in PR_WaitCondVar () at /lib64/libnspr4.so
> #3  0x00007f5bd4a5ba63 in eq_loop () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 19 
> (Thread 0x7f5babd4d700 (LWP 15574)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 18 
> (Thread 0x7f5bab54c700 (LWP 15575)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 17 
> (Thread 0x7f5baad4b700 (LWP 15576)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 16 
> (Thread 0x7f5baa54a700 (LWP 15577)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 15 
> (Thread 0x7f5ba9d49700 (LWP 15578)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 14 
> (Thread 0x7f5ba9548700 (LWP 15579)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 13 
> (Thread 0x7f5ba8d47700 (LWP 15580)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 12 
> (Thread 0x7f5ba8546700 (LWP 15581)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 11 
> (Thread 0x7f5ba7d45700 (LWP 15582)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 10 
> (Thread 0x7f5ba7544700 (LWP 15583)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 9 
> (Thread 0x7f5ba6d43700 (LWP 15584)):
> #0  0x00007f5bd189ae9d in poll () at /lib64/libc.so.6
> #1  0x00007f5bd2854bc7 in _pr_poll_with_poll () at /lib64/libnspr4.so
> #2  0x0000564591e07049 in connection_read_operation ()
> #3  0x0000564591e0765d in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 8 
> (Thread 0x7f5ba6542700 (LWP 15585)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 7 
> (Thread 0x7f5ba5d41700 (LWP 15586)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 6 
> (Thread 0x7f5ba5540700 (LWP 15587)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 5 
> (Thread 0x7f5ba4d3f700 (LWP 15588)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 4 
> (Thread 0x7f5ba453e700 (LWP 15589)):
> #0  0x00007f5bd21fc945 in pthread_cond_wait@@GLIBC_2.3.2 () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd2853290 in PR_WaitCondVar () at /lib64/libnspr4.so
> #2  0x0000564591e05fce in [IDLE THREAD] connection_wait_for_new_work 
> ()
> #3  0x0000564591e075d7 in connection_threadmain ()
> #4  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #5  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #6  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 3 
> (Thread 0x7f5ba3900700 (LWP 15590)):
> #0  0x00007f5bd189cc03 in select () at /lib64/libc.so.6
> #1  0x00007f5bd4acc599 in DS_Sleep () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #2  0x00007f5bc1ea5c6e in backend_set_entry_from () at 
> /usr/lib64/dirsrv/plugins/schemacompat-plugin.so
> #3  0x00007f5bc1ea8906 in backend_shr_set_entry_cb () at 
> /usr/lib64/dirsrv/plugins/schemacompat-plugin.so
> #4  0x00007f5bd4aac614 in send_ldap_search_entry_ext () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #5  0x00007f5bd4aace0c in send_ldap_search_entry () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #6  0x00007f5bd4a87ca4 in send_entry.isra.0 () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #7  0x00007f5bd4a88208 in send_results_ext.constprop.4 () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #8  0x00007f5bd4a8a0d1 in op_shared_search () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #9  0x00007f5bd4a9b507 in search_internal_callback_pb () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #10 0x00007f5bc1ead018 in backend_shr_set_config_entry_add () at 
> /usr/lib64/dirsrv/plugins/schemacompat-plugin.so
> #11 0x00007f5bc1ea7a2d in backend_set_config_entry_add_cb () at 
> /usr/lib64/dirsrv/plugins/schemacompat-plugin.so
> #12 0x00007f5bc1ea8ac1 in backend_shr_data_initialize_thread_cb () at 
> /usr/lib64/dirsrv/plugins/schemacompat-plugin.so
> #13 0x00007f5bc1eba597 in wrap_pthread_starter () at 
> /usr/lib64/dirsrv/plugins/schemacompat-plugin.so
> #14 0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #15 0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #16 0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 2 
> (Thread 0x7f5ba30ff700 (LWP 15606)):
> #0  0x00007f5bd21fc2ae in pthread_rwlock_wrlock () at 
> /lib64/libpthread.so.0
> #1  0x00007f5bd4a7f0e5 in slapi_mtn_be_set_readonly () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #2  0x00007f5bc3e921ac in instance_set_busy_and_readonly () at 
> /usr/lib64/dirsrv/plugins/libback-ldbm.so
> #3  0x00007f5bc3e8d5d1 in ldbm_back_ldbm2index () at 
> /usr/lib64/dirsrv/plugins/libback-ldbm.so
> #4  0x00007f5bd4ac5942 in task_index_thread () at 
> /usr/lib64/dirsrv/libslapd.so.0
> #5  0x00007f5bd2858c8b in _pt_root () at /lib64/libnspr4.so
> #6  0x00007f5bd21f8dd5 in start_thread () at /lib64/libpthread.so.0
> #7  0x00007f5bd18a5b3d in clone () at /lib64/libc.so.6 Thread 1 
> (Thread 0x7f5bd5135940 (LWP 15536)):
> #0  0x00007f5bd21f9f47 in pthread_join () at /lib64/libpthread.so.0
> #1  0x00007f5bd4d34b2f in ns_thrpool_wait () at 
> /usr/lib64/dirsrv/libnunc-stans.so.0
> #2  0x0000564591e0d862 in slapd_daemon ()
> #3  0x0000564591dfe86f in main ()
>
> Thanks & Regards.
> ______________________________
>
> -----Original Message-----
> From: thierry bordaz <[email protected]>
> Sent: Thursday, May 03, 2018 9:31
> To: Rob Crittenden <[email protected]>; FreeIPA users list 
> <[email protected]>; SOLER SANGUESA Miguel 
> <[email protected]>
> Cc: Ludwig Krispenz <[email protected]>
> Subject: Re: [Freeipa-users] Re: Problem on dirsrv when updating from 
> 4.5.0 (RHEL 7.4) to 4.5.4 (RHEL 7.5)
>
> Hi,
>
> During indexing task we should see in the task status the periodic 
> progression of the indexing.
> May be the indexing is hanging somewhere. When the problem occurs could you 
> provide a pstack of the dirsrv server ?
>
> best regards
> thierry
>
> On 05/02/2018 10:27 PM, Rob Crittenden wrote:
>> SOLER SANGUESA Miguel via FreeIPA-users wrote:
>>> Hello,
>>>
>>> This is the output of the command (seems that is not complete):
>>>
>>> # ldapsearch -H ldapi://%2fvar%2frun%2fslapd-IPA-EXAMPLE-ORG.socket
>>> -b
>>> cn=indextask_description_137444551994158920_5958,cn=index,cn=tasks,c
>>> n
>>> =config
>>> -s base
>>> SASL/EXTERNAL authentication started SASL username:
>>> gidNumber=0+uidNumber=0,cn=peercred,cn=external,cn=auth
>>> SASL SSF: 0
>>> # extended LDIF
>>> #
>>> # LDAPv3
>>> # base
>>> <cn=indextask_description_137444551994158920_5958,cn=index,cn=tasks,
>>> c
>>> n=config>
>>> with scope baseObject
>>> # filter: (objectclass=*)
>>> # requesting: ALL
>>> #
>>>
>>> # indextask_description_137444551994158920_5958, index, tasks, 
>>> config
>>> dn:
>>> cn=indextask_description_137444551994158920_5958,cn=index,cn=tasks,c
>>> n
>>> =conf
>>>    ig
>>> objectClass: top
>>> objectClass: extensibleObject
>>> nsindexattribute: description
>>> nsinstance: userRoot
>>> cn: indextask_description_137444551994158920_5958
>>> nstaskcurrentitem: 0
>>> nstasktotalitems: 1
>> IPA is looking for nstaskstatus and since that isn't there it is 
>> looping forever.
>>
>> I've cc'd a couple of the 389-ds devs to see what they think about it.
>>
>> rob
>>
>>> # search result
>>> search: 3
>>> result: 0 Success
>>>
>>> # numResponses: 2
>>> # numEntries: 1
>>>
>>> Thanks & Regards.
>>> ______________________________
>>> -----Original Message-----
>>> From: Rob Crittenden <[email protected]>
>>> Sent: Tuesday, May 01, 2018 15:18
>>> To: FreeIPA users list <[email protected]>
>>> Cc: SOLER SANGUESA Miguel <[email protected]>
>>> Subject: Re: [Freeipa-users] Re: Problem on dirsrv when updating 
>>> from
>>> 4.5.0 (RHEL 7.4) to 4.5.4 (RHEL 7.5)
>>>
>>> SOLER SANGUESA Miguel via FreeIPA-users wrote:
>>>> Hello,
>>>>
>>>> Thank you for your answer, now dirsrv can start, but after running 
>>>> the "
>>>> [email protected] " it hungs:
>>>>
>>>> # ipa-server-upgrade
>>>>
>>>> Upgrading IPA:. Estimated time: 1 minute 30 seconds
>>>>
>>>>      [1/8]: saving configuration
>>>>
>>>>      [2/8]: disabling listeners
>>>>
>>>>      [3/8]: enabling DS global lock
>>>>
>>>>      [4/8]: starting directory server
>>>>
>>>>      [5/8]: updating schema
>>>>
>>>>      [6/8]: upgrading server
>>>>
>>>> The latest messages on the log is (there are no logs on the lasts 2h):
>>>>
>>>> 2018-05-01T08:13:14Z DEBUG
>>>> ---------------------------------------------
>>>>
>>>> 2018-05-01T08:13:14Z DEBUG Final value after applying updates
>>>>
>>>> 2018-05-01T08:13:14Z DEBUG dn:
>>>> cn=description,cn=index,cn=userroot,cn=ldbm
>>>> database,cn=plugins,cn=config
>>>>
>>>> 2018-05-01T08:13:14Z DEBUG objectclass:
>>>>
>>>> 2018-05-01T08:13:14Z DEBUG      top
>>>>
>>>> 2018-05-01T08:13:14Z DEBUG      nsindex
>>>>
>>>> 2018-05-01T08:13:14Z DEBUG nsindextype:
>>>>
>>>> 2018-05-01T08:13:14Z DEBUG      eq
>>>>
>>>> 2018-05-01T08:13:14Z DEBUG      sub
>>>>
>>>> 2018-05-01T08:13:14Z DEBUG cn:
>>>>
>>>> 2018-05-01T08:13:14Z DEBUG      description
>>>>
>>>> 2018-05-01T08:13:14Z DEBUG nssystemindex:
>>>>
>>>> 2018-05-01T08:13:14Z DEBUG      false
>>>>
>>>> 2018-05-01T08:13:19Z DEBUG Creating task to index attribute:
>>>> description
>>>>
>>>> 2018-05-01T08:13:19Z DEBUG Task id:
>>>> cn=indextask_description_137444551994158920_5958,cn=index,cn=tasks,
>>>> c
>>>> n=
>>>> config
>>>>
>>>> If I check the ipa services, dirsrv is the only one running:
>>>>
>>>> # ipactl status
>>>>
>>>> Directory Service: RUNNING
>>>>
>>>> krb5kdc Service: STOPPED
>>>>
>>>> kadmin Service: STOPPED
>>>>
>>>> named Service: STOPPED
>>>>
>>>> httpd Service: STOPPED
>>>>
>>>> ipa-custodia Service: STOPPED
>>>>
>>>> ntpd Service: RUNNING
>>>>
>>>> pki-tomcatd Service: STOPPED
>>>>
>>>> smb Service: STOPPED
>>>>
>>>> winbind Service: STOPPED
>>>>
>>>> ipa-otpd Service: STOPPED
>>>>
>>>> ipa-dnskeysyncd Service: STOPPED
>>>>
>>>> ipa: INFO: The ipactl command was successful
>>>>
>>>> Should I stop the ipa-server-upgrade and start ipa services?
>>> It depends on how many entries you have. This is an indexing task 
>>> and while 2 hours seems a bit excessive, it depends on how much work 
>>> it has to do.
>>>
>>> The 389-ds access and/or error logs may provide details.
>>>
>>> rob
>>>
>>>> Thanks.
>>>>
>>>> -----Original Message-----
>>>> From: Alexander Bokovoy <[email protected]>
>>>> Sent: Tuesday, May 01, 2018 9:56
>>>> To: FreeIPA users list <[email protected]>
>>>> Cc: SOLER SANGUESA Miguel <[email protected]>
>>>> Subject: Re: [Freeipa-users] Problem on dirsrv when updating from
>>>> 4.5.0 (RHEL 7.4) to 4.5.4 (RHEL 7.5)
>>>>
>>>> On ti, 01 touko 2018, SOLER SANGUESA Miguel via FreeIPA-users wrote:
>>>>
>>>>    >hello,
>>>>
>>>>    >
>>>>
>>>>    >I have an IPA master that updated from 4.5.0 (RHEL 7.4) to 
>>>> 4.5.4 (RHEL 7.5). An hour later I tried to do the same with the 
>>>> unique replica I have, but after update dirsrv is not starting.
>>>>
>>>>    >It says it is needed run "ipa-server-upgrade", but it also fails:
>>>>
>>>>    ># ipactl start
>>>>
>>>>    >Upgrade required: please run ipa-server-upgrade command 
>>>> Aborting ipactl
>>>>
>>>>    >
>>>>
>>>>    ># ipa-server-upgrade
>>>>
>>>>    >Upgrading IPA:. Estimated time: 1 minute 30 seconds
>>>>
>>>>    >  [1/8]: saving configuration
>>>>
>>>>    >  [2/8]: disabling listeners
>>>>
>>>>    >  [3/8]: enabling DS global lock
>>>>
>>>>    >  [4/8]: starting directory server
>>>>
>>>>    >  [error] CalledProcessError: Command '/bin/systemctl start
>>>>
>>>>    >[email protected]
>>>> <mailto:[email protected]>' returned non-zero exit 
>>>> status
>>>> 1
>>>>
>>>>    >  [cleanup]: stopping directory server
>>>>
>>>>    >  [cleanup]: restoring configuration
>>>>
>>>>    >IPA server upgrade failed: Inspect /var/log/ipaupgrade.log and 
>>>> run command ipa-server-upgrade manually.
>>>>
>>>>    >Unexpected error - see /var/log/ipaupgrade.log for details:
>>>>
>>>>    >CalledProcessError: Command '/bin/systemctl start
>>>>
>>>>    >[email protected]
>>>> <mailto:[email protected]>' returned non-zero exit 
>>>> status
>>>> 1 The
>>>>
>>>>    >ipa-server-upgrade command failed. See /var/log/ipaupgrade.log 
>>>> for more
>>>>
>>>>    >information
>>>>
>>>>    >
>>>>
>>>>    >On the log I can see:
>>>>
>>>>    >2018-04-30T14:36:15Z DEBUG Starting external process
>>>>
>>>>    >2018-04-30T14:36:15Z DEBUG args=/bin/systemctl is-active
>>>>
>>>>    >[email protected]
>>>> <mailto:[email protected]>
>>>> 2018-04-30T14:36:15Z DEBUG Process
>>>>
>>>>    >finished, return code=3 2018-04-30T14:36:15Z DEBUG stdout=failed ...
>>>>
>>>>    >2018-04-30T14:36:15Z DEBUG   [4/8]: starting directory server
>>>>
>>>>    >2018-04-30T14:36:15Z DEBUG Starting external process
>>>>
>>>>    >2018-04-30T14:36:15Z DEBUG args=/bin/systemctl start
>>>>
>>>>    >[email protected]
>>>> <mailto:[email protected]>
>>>> 2018-04-30T14:36:15Z DEBUG Process
>>>>
>>>>    >finished, return code=1 2018-04-30T14:36:15Z DEBUG stdout=
>>>>
>>>>    >2018-04-30T14:36:15Z DEBUG stderr=Job for 
>>>> [email protected] 
>>>> <mailto:[email protected]>
>>>> failed because the control process exited with error code. See 
>>>> "systemctl status [email protected] 
>>>> <mailto:[email protected]>" and "journalctl -xe" for 
>>>> details.
>>>>
>>>>    >
>>>>
>>>>    >2018-04-30T14:36:15Z DEBUG Traceback (most recent call last):
>>>>
>>>>    >  File
>>>> "/usr/lib/python2.7/site-packages/ipaserver/install/service.py",
>>>> line 504, in start_creation
>>>>
>>>>    >    run_step(full_msg, method)
>>>>
>>>>    >  File
>>>> "/usr/lib/python2.7/site-packages/ipaserver/install/service.py",
>>>> line 494, in run_step
>>>>
>>>>    >    method()
>>>>
>>>>    >  File
>>>> "/usr/lib/python2.7/site-packages/ipaserver/install/upgradeinstance.
>>>> py
>>>> ",
>>>> line 95, in __start
>>>>
>>>>    >    srv.start(self.serverid, ldapi=True)
>>>>
>>>>    >  File
>>>> "/usr/lib/python2.7/site-packages/ipaplatform/redhat/services.py",
>>>> line 161, in start
>>>>
>>>>    >    instance_name, capture_output=capture_output, wait=wait)
>>>>
>>>>    >  File
>>>> "/usr/lib/python2.7/site-packages/ipaplatform/base/services.py",
>>>> line 294, in start
>>>>
>>>>    >    skip_output=not capture_output)
>>>>
>>>>    >  File "/usr/lib/python2.7/site-packages/ipapython/ipautil.py",
>>>> line 542, in run
>>>>
>>>>    >    raise CalledProcessError(p.returncode, arg_string,
>>>> str(output))
>>>>
>>>>    >CalledProcessError: Command '/bin/systemctl start
>>>>
>>>>    >[email protected]
>>>> <mailto:[email protected]>' returned non-zero exit 
>>>> status
>>>> 1
>>>>
>>>>    >
>>>>
>>>>    >2018-04-30T14:36:15Z DEBUG   [error] CalledProcessError: 
>>>> Command '/bin/systemctl start [email protected] 
>>>> <mailto:[email protected]>' returned non-zero exit 
>>>> status
>>>> 1
>>>>
>>>>    >
>>>>
>>>>    >Checking /var/log/dirsrv/slapd-IPA-EXAMPLE-ORG/errors I show:
>>>>
>>>>    >[30/Apr/2018:16:04:52.584220922 +0200] - ERR - 
>>>> slapd_bootstrap_config
>>>> - The default password storage scheme could not be read or was not 
>>>> found in the file /etc/dirsrv/slapd-IPA-EXAMPLE-ORG/dse.ldif. It is 
>>>> mandatory.
>>>>
>>>>    >
>>>>
>>>>    >Checking on internet I show that "dse.ldif" could be corrupted, 
>>>> so I changed with "dse.ldif.startOK" without any change and then I 
>>>> changed with "dse.ldif.bak". The problem persist but the error has changed:
>>>>
>>>>    >[30/Apr/2018:16:32:13.435210918 +0200] - NOTICE - 
>>>> config_set_port
>>>> -
>>>>
>>>>    >Non-Secure Port Disabled
>>>>
>>>>    >[30/Apr/2018:16:32:13.556581301 +0200] - ERR - 
>>>> symload_report_error
>>>> -
>>>>
>>>>    >Netscape Portable Runtime error -5975:
>>>>
>>>>    >/usr/lib64/dirsrv/plugins/libreplication-plugin.so: undefined
>>>> symbol:
>>>>
>>>>    >replication_legacy_plugin_init
>>>>
>>>>    >[30/Apr/2018:16:32:13.561590553 +0200] - ERR - 
>>>> symload_report_error
>>>> -
>>>>
>>>>    >Could not load symbol "replication_legacy_plugin_init" from
>>>>
>>>>    >"/usr/lib64/dirsrv/plugins/libreplication-plugin.so" for plugin 
>>>> Legacy
>>>>
>>>>    >Replication Plugin
>>>>
>>>>    >[30/Apr/2018:16:32:13.564590264 +0200] - ERR - 
>>>> load_plugin_entry
>>>> - Unable to load plugin "cn=Legacy Replication 
>>>> Plugin,cn=plugins,cn=config"
>>>>
>>>>    >
>>>>
>>>>    >I saw a bug about this problem, but it is still opened:
>>>>
>>>>> https://bugzilla.redhat.com/show_bug.cgi?format=multiple&id=152944
>>>>> 2
>>>>    >
>>>>
>>>>    >Any idea how to fix the issue?
>>>>
>>>>    >
>>>>
>>>>    >If it is not possible to fix it, can I remove the replica from 
>>>> IPA and install it again with the same name?
>>>>
>>>> A quick fix could be to remove an entry for cn=Legacy Replication 
>>>> Plugin,cn=plugins,cn=config from 
>>>> /etc/dirsrv/slapd-IPA-EXAMPLE-ORG/dse/ldif
>>>>
>>>> when dirsrv is down.
>>>>
>>>> --
>>>>
>>>> / Alexander Bokovoy
>>>>
>>>> Sr. Principal Software Engineer
>>>>
>>>> Security / Identity Management Engineering Red Hat Limited, Finland
>>>>
>>>>
>>>>
>>>> _______________________________________________
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>>>> [email protected]
>>>>
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