Hi Reza,
I need more information that you have supplied. Please look over the instructions in surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
thanks
doug
Reza Rajimehr wrote:
Hi,
In the FS-FAST analysis stream (dev environment), I used autoreg-sess
command as follows:
autoreg-sess -s mvp022106 -df df.txt
It successfully generated a register.dat file in the bold directory. Then
I used tkregister-sess as follows:
tkregister-sess -s mvp022106 -df df.txt -rsd t1epi
When tkregsiter window comes, the structural volume (anatomical T1) is OK
but t1epi volume is completely corrupted. However, running tkregister-sess
with '-rsd t1epi' generates another register.dat file in the directory
above the bold directory. When I use this register.dat file in the
tkregister-sess command, t1epi volume looks fine and almost in the
appropriate location as T1 volume.
I also tried spmregister-sess instead of autoreg-sess:
spmregister-sess -s mvp022106 -df df.txt -fsd bold
A register.dat file is generated by this command in the bold directory.
Then I used tkregister-sess as follows:
tkregsiter-sess -s mvp022106 -df df.txt -fsd bold
In the tkregsiter window, the functional volume looks fine but it is
largely displaced. I could finally register it manually.
I might do something wrong with autoreg-sess and spmregister-sess or is
there a bug for these commands?
Thanks,
Reza
********************************
Reza Rajimehr, MD
NMR Athinoula A. Martinos Center
Department of Radiology
Massachusetts General Hospital (MGH)
Building 149, 13th St.
Charlestown, MA 02129
Email: [EMAIL PROTECTED]
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--
Douglas N. Greve, Ph.D.
MGH-NMR Center
[EMAIL PROTECTED]
Phone Number: 617-724-2358
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In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
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