yanxia wrote:
Dear All,
I am a new user of FreeSurfer. I have two questions:
1> Is there a way to convert FreeSurfer surface files to Analyze
format? I use 'tkmedit bert brain.mgz lh.pial' to view the image with
the surface bounday, and hope that I can save the image and the
surface boundary with Analyze format.
I'm not sure what you mean here. If you want a binary volume mask of the
surface, on is automatically created with reconstruction. It is in
mri/?h.ribbon.mgz, which can be converted to analyze with mri_convert as
you've done below.
2> mri_convert can be use to convert *.mgz file to Analyze file. I use
"mri_convert brain.mgz brain.img"> It is empty when I try to open
"brain.img" with MRICON software.
Don't know anything about MRICON. The cmd line look right. Try loading
brain.img into tkmedit. If it's there, then you're on your own.
doug
Thank you so sume.
Best Regards,
Yan
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Douglas N. Greve, Ph.D.
MGH-NMR Center
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