mri_convert brain.mgz brain.img
Avram Holmes wrote:
Hi,
While we are on the format conversion topic. I am trying to convert an
FreeSurfer fomat structural into analyze format .img/.hdr file. This is
following the freesurfer skullstrip and tkmedit steps.
Thanks,
Avram
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Avram Holmes
Department of Psychology
Harvard University
1210 William James Hall Phone:(617) 495-0790
33 Kirkland Street Fax:(617) 495-3728
Cambridge, MA 02138, USA Email: [EMAIL PROTECTED]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Quoting Doug Greve <[EMAIL PROTECTED]>:
tkregister2 --mov yourspm.img --s yoursubject --reg register.dat --regheader
yourspm.img should have a matlab4 yourspm.mat file
There also a cmd-line program called spmregister, which you can run
something like:
spmregister --mov yourspm.img --s yoursubject --reg register.dat
doug
jswonder wrote:
Hello all,
I am looking for a way to convert an SPM .mat to a FreeSurfer registration
matrix (register.dat); basically, something like the old spmmat2register
command, but not obsolete...any suggestions?
Thanks!
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--
Douglas N. Greve, Ph.D.
MGH-NMR Center
[EMAIL PROTECTED]
Phone Number: 617-724-2358
Fax: 617-726-7422
In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
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_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
--
Douglas N. Greve, Ph.D.
MGH-NMR Center
[EMAIL PROTECTED]
Phone Number: 617-724-2358
Fax: 617-726-7422
In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
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