Hi Doug,

On 26. Jun 2006, at 21:19 Uhr, Doug Greve wrote:


HI Sebastian,

I made a mod to this in development version, but it operates slightly differently in that you set the "nth" run with -run. Eg, -run 2 would mean to use the 2nd run. Otherwise, if you run it on more than one session, the run that you specify might not exist. Would this work for you?
Ah great, I did not think about this. All I wanted to assure is that the brain mask was from the same run as my moco reference volume (and this only because it "feels" right to do so ;)).

ahoi
        Sebastian


doug


Sebastian Moeller wrote:

Hi List,

to follow up my mail from several days ago, all mkbrainmask-sess (v3.0.2 centos4 x86_64) really needs to be able to select the run from which to take the run-number are the following lines:
case "-run"
    set run = $argv[1]; shift;
    breaksw

somewhere between the label "parse_args:" and the command "goto parse_args_return".

Ahoi
    Sebastian


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Douglas N. Greve, Ph.D.
MGH-NMR Center
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