Hi Alex - It looks like your bvecs/bvals files were saved from a windows program? The end-of-line characters are not recognized by linux (try running the more command on them, for example, to see the problem).
Re: your other question, I don't know what files your other processing has created. You can look at the tracula tutorial and see what files each step of trac-all outputs and try to copy them over from your other analysis with the names that trac-all expects, but that may be more trouble than rerunning everything from scratch. Hope this helps, a.y On Wed, 30 Nov 2011, Alexander Lebedev wrote: > Dear Freesurfer users and developers, > > I decided to run Tracula with our DTI data and eventually got bvecs > error. I tried different solutions without any results: added decimals > after zeros, shortened all decimal points to 3, modified my locale - > nothing helped. > I'm providing you my trac-all log, original (with shortened and long decimal > points: MMADI_C* ) and output bvecs- and bvals-, parameter file and my locale > as well. > [Workstation: CentOS 5.6 x86_64] > > Any advises and suggestions are very welcome... > Thank you beforehand. > --- > Best Regards, > Alex Lebedev > Stavanger University Hospital, Norway > > P.S.: And one short question... I was just thinking that it might make sense > to perform some of the preprocessing steps in FSL (considering that FS and > FSL share these algorithms and the preprocessing for TBSS ran perfectly), but > I didn't find any solution on this. Is there such an opportunity? > > *** > LOCALE: > > LANG=en_US.UTF-8 > LC_CTYPE="en_US" > LC_NUMERIC="en_US" > LC_TIME="en_US" > LC_COLLATE="en_US" > LC_MONETARY="en_US" > LC_MESSAGES="en_US" > LC_PAPER="en_US" > LC_NAME="en_US" > LC_ADDRESS="en_US" > LC_TELEPHONE="en_US" > LC_MEASUREMENT="en_US" > LC_IDENTIFICATION="en_US" > LC_ALL=en_US > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
