Hi Rashmi

does it look correct in our visualization tools? If so, you'll need to talk to the AFNI folks.

cheers
Bruce


On Wed, 4 Apr 2012, Rashmi Singh wrote:

Hello,
 I converted the aseg. mgz files to nii format and created a hippcampal mask
with 3dcalc.
Using AFNI I opened the hippocampal mask as overlay on the brainmask .nii
image  as underlay.  For some subjects the hippocampus is not at the correct
position.
Please advise.
Thanks,
Rashmi.


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