sure. Thanks for pointing out the BA44 issue. We'll put together a fix in the next couple of weeks
Bruce
On Mon, 25 Jun 2012, Gabor Perlaki wrote:

Dear Bruce,

I've checked the pars triangularis. It was right-lateralized in 79 subjects
and left-lateralized in only 19 subjects.

Thanks, Gabor

2012/6/23 Bruce Fischl <[email protected]>
      the structures don't need a threshold. Do you know that pars
      triangularis is left lateralized? For the BAs will get you a
      solution

      On Sat, 23 Jun 2012, Gabor Perlaki wrote:

            Dear Bruce,

            We don't used any thresholding by ourselves, we just
            took BA44 volumes out
            of the text-file in the stats directory.
            Should we use thresholded values instead of the
            volumes reported by the text
            files in the stats directory?
            Could we use the volumes reported by the aparc.stats
            and aseg.stats files
            for any statistical analyses, or do we need
            threshold that structures as
            well?


            Thanks,
            Gabor

            2012/6/23 Bruce Fischl <[email protected]>
                 Hi Gabor

                 are you thresholding the BA4 label? In 5.2 we
            will distribute
                 some tools to automatically threshold the
            labels so that the
                 predicted area has the average area of the
            input labels. The
                 right BA44 had more spatial spread than the
            left, so you might
                 be including a lot of low probability vertices.

                 cheers
                 Bruce

                 On Sat, 23 Jun 2012, Gabor Perlaki wrote:

                       Dear Bruce,

                       In the paper "Left-right asymmetry in
            volume and
                       number of neurons in adult
                       Broca's area." by Katrin Amunts, 10
            subjects (5 men
                       and 5 women) were
                       studied, and the volume of BA44 was
            greater in the
                       left hemisphere than in
                       the right in all ten cases. So, it is
            very strange
                       that the volume of BA44
                       was greater in the right hemisphere in
            all of the 80
                       subjects analyzed by
                       Eniko.

                       Thanks,
                       Gabor




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