Jon, If the error is where the perirhinal labels cannot be found in the fsaverage that sits in your subjects dir, then that issue was fixed on a more recent beta 5.2. recon-all now checks if the perirhinal labels exist in the fsaverage found in the subjects dir (which might not be the case if running on prior data where the copy of fsaverage was made) and if the labels do not exist it creates a new link. What that this issue? or a new one?
Nick On Mon, 2013-01-28 at 14:50 -0500, Bruce Fischl wrote: > Hi Jon > > what were the errors? We will want to fix them prior to official release. > > thanks > Bruce > On > Mon, 28 Jan 2013, Jonathan Holt wrote: > > > hello all, > > > > Just for reference, we were having an issue with recon-all v 5.2 exiting > > with errors due to issues with the perirhinal cortex. We were able to > > simply commented out the parts of the script dealing with the perirhinal > > cortex. Just an FYI to those who may be having a similar problem. > > > > Jon > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
