Make sure that there is an orig.mgz in $SUBJECTS_DIR/MGXX_SurferOutput/mri Also, make sure to send the full terminal output doug
On 03/28/2013 02:13 PM, Borzello, Mia wrote: > Hi Freesurfers, > > I'm in the middle of coregistering a CT and MRI, and after running > spmregister --s MGXX_SurferOutput --mov ct.mgz --reg spm.reg.dat --fsvol orig > > I get the error that orig.mgz is not found in COR or MGZ formats, but I have > an orig.mgz file in my folder. Any help on this would be awesome! > > Thanks, > Mia > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
