Try mri_binarize followed by mri_cor2label doug
On 05/20/2013 03:57 AM, zhang mingxia wrote: > Dear Freesurfer experts, > > I analyzed functional data by spm and made a mask (analyze format). I > have also run recon-all of structural data. > > My question is: how to extract mean volume (from structural data) of > the mask(from spm)? > > I only extracted volume(or thickness) of ROI of a label edited by > myself and annotation file. If I can convert analyze format to a label > or annotation file, I can use that method. But how to convert analyze > format to a label or annotation? > > Or is there any easy way? > > Thanks in advance! > > Mingxia Zhang > > > > > > _______________________________________________ > Freesurfer mailing list > [email protected] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center [email protected] Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
