Hi Salil have you checked the talairach.xfm to make sure it's accurate? There are options to recon-all to strip less - check out the help.
cheers Bruce On Fri, 5 Jul 2013, Salil Soman wrote: > Hi, > I have a study for which the original T1 looks good, was obtained > identically to dozens of other studies that went through freesurfer without > problem. For some reason this study keeps getting stripped down to a little > more than its brainstem. Then the rest of the processing fails with an error > of retesselation. Log files attached. Any suggestions on how I can properly > process this data? > > Best wishes, > > Sal > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
