Hi Fabrice, what would converting a thickness file (which has one value for each point on the surface) to a volume mean? Would you want just a strand of voxels with the thickness values at the gray/white boundary? At the pial surface? Would you want the ribbon filled with the same value? If you want the distance to either surface you can use mris_distance_transform.
cheers Bruce On Wed, 18 Sep 2013, Fabrice Crivello wrote: > Dear Freesurfer users, > > I am searching how to use the mri_surf2vol command in order to convert a > "lh.thickness" file into a 3D .nii file (in the original subject space). > Many Thanks, > > Fabrice > > > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
