Hi Doug,
for this analysis, I would like to stay in volume space; the data are
aligned to a primate volume template. I am trying to do a group analysis of
the functional data as a next step (see this previous email:
http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg33295.html).
If I just want to smooth my data in volume space, is there a better option
than spatialsmooth-sess in v5.1?
Caspar
2014/1/10 Douglas N Greve <gr...@nmr.mgh.harvard.edu>
> If you just want to sample your volume on the surface and smooth it there,
> use mri_vol2surf with --surf-fwhm. Send me your command line when you have
> one and I'll verify it is the right thing.
> doug
>
>
>
> On 01/09/2014 10:21 PM, Caspar M. Schwiedrzik wrote:
>
>> Hi Doug, I found a way to build it in myself. I am using
>> spatialsmooth-sess from v5.1. I need to smooth some functional data that I
>> have preprocessed through some other program until this point.
>> What should I be using instead of spatialsmooth-sess if I only want to
>> smooth?
>> Thanks, Caspar
>>
>> On Thursday, January 9, 2014, Douglas Greve wrote:
>>
>>
>> No, sorry. Why are you using such an old version?
>> doug
>>
>>
>>
>>
>>
>> On 1/9/14 5:26 PM, Caspar M. Schwiedrzik wrote:
>>
>>> Hi Doug,
>>> do you have a version of spatialsmooth-sess with the option to
>>> set mask file name?
>>> Thanks, Caspar
>>>
>>>
>>>
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>>
>>
> --
> Douglas N. Greve, Ph.D.
> MGH-NMR Center
> gr...@nmr.mgh.harvard.edu
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