I think your hardware is fine, but your software environment needs fixing (see my previous email)

cheers
Bruce
On Tue, 4 Feb 2014, Saurabh Thakur wrote:

Hi,

I am using laptop with 8Gb RAM,
i7 Core processor,
and
enough HDD....

still i m getting same erro ( /usr/local/freesurfer/tktools/tkmedit.bin:
Command not found. ) because i m working on laptop...?

or

"recon-all --help " is working but tkmedit is not working

Hope to get response asap.

Thanks in advance.


Saurabh Thakur,


On Tue, Feb 4, 2014 at 2:09 PM, Markus Gschwind <[email protected]>
wrote:
      Hi Saurabh,
 
I recently installed FS un ubuntu 12.04, and it was not difficult.
 
I would recommend that you again download the file from here
http://surfer.nmr.mgh.harvard.edu/fswiki/Download (I took the Centos4
file)
 
to make sure that it is complete.
 
Than you "untar" the file at any given place (most people recomment
/usr/local/ but you need to do it in "sudo" mode).
 
Then make sure that you put the license file at the right place
(http://surfer.nmr.mgh.harvard.edu/fswiki/LinuxInstall)
 
and adapt the configuration file
(http://surfer.nmr.mgh.harvard.edu/fswiki/SetupConfiguration)
 
I used bash and it worked well.
 
Take care that you have writing permission on the folders you want to
use ($SUBJECT_DIR).
For that reason I copied the folder "bert" to my home folder in order
to be able to run the installation test as recommended here:
http://surfer.nmr.mgh.harvard.edu/fswiki/TestingFreeSurfer
 
Hope that helps!
Cheers,
Markus

2014-02-04 Saurabh Thakur <[email protected]>:
      Hello everyone,

Can u anyone help me in simplest and best way to install
freesurfer on

i m not able to run command :
1. tkmedit
2. tksurfer.

System specification:

Dell laptop
Ubuntu 12.04 LTS
RAM 8Gb
Graphics cards: Nvidia cards 1 Gb

Thanks in advance.

Saurabh Thakur,




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