That is the jacobian of the white matter surface when it is registered 
to fsaverage (not related to the actual white matter).
On 03/02/2014 08:40 PM, Yang, Daniel wrote:
> Hi FreeSurfers,
>
> A related question (I can't find the answers on the FS website): 
> what's jacobian_white (as a measure)?
>
> Thanks!
> Daniel
>
> -- 
> Daniel (Yung-Jui) Yang, Ph.D.
> Postdoctoral Researcher
> Yale Child Study Center
> New Haven, CT
> Tel: (203) 737-5454
> E-mail: _yung-jui.yang@yale.edu_
>
> On 3/2/14 7:18 PM, "Yang, Daniel" <yung-jui.y...@yale.edu 
> <mailto:yung-jui.y...@yale.edu>> wrote:
>
>     Dear FreeSurfer Experts,
>
>     FS provides thickness as the DV in qdec and mri-glmfit. Do you
>     know how I can have WM vol as the DV in these tools with the same
>     GLM model? For example, I want to test the WM regions that is most
>     strongly positively correlated with a given factor.
>
>     Thanks!
>     Daniel
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