Hi Saurabh,
On Mar 4, 2014, at 07:56 , Saurabh Thakur <srbht...@gmail.com> wrote:
> Hi Markus Gschwind,
>
> I am using Matlab 7.12.0.635 (R2011a),
>
> I am not able to read the dicom image neither brain.mgz file nor the surface
> file in matlab.
>
> I have added these file in matlab directory.
>
> Comment or error i m getting is :
>
> for example :
> >> load_dicom_fl(IM_0001)
> ??? Undefined function or variable 'IM_0001'.
>
> 2nd example :
> >> MRIread(brain.mgz,brainMRI.hdr)
> ??? Undefined variable "brain" or function "brain.mgz".
>
You need to supply the full path to the volumes in a string, so
assuming you called matlab from the same directory where brain.mgz is located,
or used mat lab's "cd('/patrh/to/your/data')" to make sure you are there. Then
simply calling "MRIread('brain.mgz');" should do the trick; note: only put the
stuff between the double quotes into the matlab command window.
best
Sebastian
> I looking forward to work on matlab along with freesurfer.
>
> Looking for your reply asap.
> Thanks for reply.
>
> cheers
> Saurabh Thakur,
>
>
>
>
>
>
> On Tue, Mar 4, 2014 at 12:17 PM, <markus.gschw...@gmail.com> wrote:
> Hi!
>
> Can you specify what happens when you try to read the files?
>
>
>
>
> On 4 mars 2014, at 06:44, Saurabh Thakur <srbht...@gmail.com> wrote:
>
> > Hello Freesurfer,
> >
> > I am trying to runs MRIread.m file in matlab.
> >
> > But it is not reading the brain.mgz or any other format.
> >
> > Can u help in this regards.
> >
> > Thanks in advance,
> >
> > cheers
> > Saurabh Thakur,
> >
> >
> >
> >
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