What if you just load one surface:

freeview -f good_output/surf/lh.pial

Does it load?

Best,
Ruopeng

On 01/06/2015 03:23 PM, Hirsch, Gabriella wrote:

Hi,

I am trying to view surfaces in 3D using Freeview on my own subject data via this command (replacing the subject name);

freeview -f good_output/surf/lh.pial:annot=aparc.annot:name=pial_aparc:visible=0 \

good_output/surf/lh.inflated:overlay=lh.thickness:overlay_threshold=0.1,3::name=inflated_thickness:visible=0 \

good_output/surf/lh.inflated:visible=0 \

good_output/surf/lh.white:visible=0 \

good_output/surf/lh.pial

While Freeview loads correctly, I get an error message upon loading: “Failed to load Surface /surf/rh.pial”. I checked my subject file in /surf and the rh.pial is indeed there. I get the same error for both hemispheres.

Any help would be greatly appreciated!

Thanks,

Gabriella



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