thanks i was not using the -open x , correctly On Fri, Jul 24, 2015 at 7:37 PM, Z K <zkauf...@nmr.mgh.harvard.edu> wrote:
> Yes. That is correct. > > On Jul 24, 2015, at 7:06 PM, joseph veliz <josephveli...@gmail.com> wrote: > > so I should run one subject per 4 cores > > by using "-openmp 4" for each of the two subjects being re-conned > simultaneously? > > On Fri, Jul 24, 2015 at 2:08 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu> > wrote: > >> Hi Joseph >> >> if you have lots to get through you might be better off running two with 4 >> cores at a time. Speed increase is pretty good through 4 last time Nick >> tested, but then the benefits fall off a bit >> Bruce >> >> >> On Fri, 24 Jul 2015, joseph veliz wrote: >> >> > What is the best set up to utilize the multicore capability of >> freesurfer? >> > >> > Should we open a seperate terminal for each subject and run 3 >> simultaneous recons with the >> > -openmp 8, on each recon command line? >> > >> > Or is there a more efficient way of utilizing 8 cores and 16 gb of >> memory? >> > >> > thanks so much >> > >> > joseph >> > >> > >> > >> > >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to whom it >> is >> addressed. If you believe this e-mail was sent to you in error and the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you >> in error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. >> >> > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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