Hi all,
I am trying to extract subcortical volumes from data that has been processed
longitudinally, but I am getting the following error.
[k1204763@nanlnx9 SAGA]0% asegstats2table --qdec-long long.qdec.table.dat
--stats aseg.stats --tablefile aseg.table.txt
SUBJECTS_DIR : /home/k1204763/images/SAGA
Traceback (most recent call last):
File "/software/system/freesurfer/freesurfer-5.3.0/bin/asegstats2table", line
514, in <module>
subj_listoftuples = assemble_inputs(options)
File "/software/system/freesurfer/freesurfer-5.3.0/bin/asegstats2table", line
323, in assemble_inputs
o.subjects.append(fsid+'.long.'+row['fsid-base'].strip())
KeyError: 'fsid-base'
Do you have any ideas as to what the issue is here?
Thanks,
Amanda
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