Have you looked in /Volumes/NEW_VOLUME/GBS/117AS/stats/wmparc.stats to see if there might be a problem?
On 08/04/2015 05:43 AM, pablo najt wrote: > Dear FS experts, > I am trying to generate my stats data tables with QDEC -after > successfully loading my data table- and come across the following error. > Any recommendations would be greatly appreciated. > Thank you in advance > Pablo > > Data table loading completed successfully. > > SUBJECTS_DIR is '/Volumes/NEW_VOLUME/GBS' > > mkdir -p /Volumes/NEW_VOLUME/GBS/qdec/stats_tables/ > > > ---------------------------------------------------------- > > asegstats2table --common-segs --meas volume --tablefile > /Volumes/NEW_VOLUME/GBS/qdec/stats_tables/aseg.volume.stats.dat > --statsfile=aseg.stats --subjects 001ER 007JC 011GB 015NOK 018AM 022LH > 041WVDP 045PC 054JB 058CS 062AH 070CDc 082MOHb 085CLa 090BC 093DC > 095RA 100MOGc 103FC_6 108JMCM 117AS 121JB 137ED 156PMC 176VOD 181CD > 188SL 192AL 214VH 229PK 240PE 246KF 258TOD 267OMCN 279SB 285SK 300VW > 301EK 304CD 322MS 338JM 346FC_fep 352DFc 360PC 366BLh 383AW 387SD > 389NM_first 393AGG 398JK 403SH 409MCa 414MOB 421JC 427LH 433MON 456MWb > 461DC 464DDc 475GM 489MOC 492HGc 497RF 501POT 512EQ 532CC 561AGc 569AG > 574BH 578DCa 582RG 585AOD 589JL 596JT 600MORb 605PS 615KS 620CB 624PW > 635AG 650RCd 655PMCE 660AQ 668JG 673JK 699MOC 701TG 703MHc 711SJ 718PJ > 732PS 736HODc 741JT 750MD 758JOLT 762MJ 777MCb 783DMCM 792GF 807YG > 808MM 818NL 824MM 853MR 864AF 868ALF 872DCc 888MOB 896EF 905PG_5 914JB > 917JH 923BOM 930TL 941MM 948SC 959FD 984PL 989OB 997SG > > SUBJECTS_DIR : /Volumes/NEW_VOLUME/GBS > > Parsing the .stats files > > Building the table.. > > Writing the table to > /Volumes/NEW_VOLUME/GBS/qdec/stats_tables/aseg.volume.stats.dat > > > ---------------------------------------------------------- > > asegstats2table --common-segs --meas volume --tablefile > /Volumes/NEW_VOLUME/GBS/qdec/stats_tables/wmparc.volume.stats.dat > --statsfile=wmparc.stats --subjects 001ER 007JC 011GB 015NOK 018AM > 022LH 041WVDP 045PC 054JB 058CS 062AH 070CDc 082MOHb 085CLa 090BC > 093DC 095RA 100MOGc 103FC_6 108JMCM 117AS 121JB 137ED 156PMC 176VOD > 181CD 188SL 192AL 214VH 229PK 240PE 246KF 258TOD 267OMCN 279SB 285SK > 300VW 301EK 304CD 322MS 338JM 346FC_fep 352DFc 360PC 366BLh 383AW > 387SD 389NM_first 393AGG 398JK 403SH 409MCa 414MOB 421JC 427LH 433MON > 456MWb 461DC 464DDc 475GM 489MOC 492HGc 497RF 501POT 512EQ 532CC > 561AGc 569AG 574BH 578DCa 582RG 585AOD 589JL 596JT 600MORb 605PS 615KS > 620CB 624PW 635AG 650RCd 655PMCE 660AQ 668JG 673JK 699MOC 701TG 703MHc > 711SJ 718PJ 732PS 736HODc 741JT 750MD 758JOLT 762MJ 777MCb 783DMCM > 792GF 807YG 808MM 818NL 824MM 853MR 864AF 868ALF 872DCc 888MOB 896EF > 905PG_5 914JB 917JH 923BOM 930TL 941MM 948SC 959FD 984PL 989OB 997SG > > SUBJECTS_DIR : /Volumes/NEW_VOLUME/GBS > > Parsing the .stats files > > ERROR: The stats file /Volumes/NEW_VOLUME/GBS/117AS/stats/wmparc.stats > is not found or is too small to be a valid statsfile > > Use --skip flag to automatically skip bad stats files > > > > _______________________________________________ > Freesurfer mailing list > [email protected] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center [email protected] Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
