I've put a new linux version here that works on the dicom you sent me ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_convert
On 11/05/2015 11:27 AM, McMains, Stephanie wrote: > We are finding a conversion problem with our latest multiband/SMS data > (Using a sequence from Minnesota). The values can be very large, > greater than 53,000. These large voxels get turned into very large > negative numbers when converting to nii. This happens even if we use > the flag –odt float and/or –ns 1. When we use the –odt flag, it does > set the output data type to float32, but the values are still wrong. > > We're using FreeSurfrer 5.3.0 on CentOS 6.5 x86_64. > > Thanks, > Stephanie > +++++++++++++++++++++++++ > > Stephanie McMains > Neuroimaging Staff Scientist > Center for Brain Science > Harvard University > 52 Oxford Street > Cambridge, MA 02138 > > +++++++++++++++++++++++++ > For answers to frequently asked questions: > http://cbs.fas.harvard.edu/science/core-facilities/neuroimaging/information-investigators/faq > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
