they are commands included with FreeSurfer. try running the command with --help for usage information and examples
On Thu, 14 Jul 2016, Zach Holub wrote: > Awesome. Thanks for the quick reply. What program are those tables in? > > Sent from my iPhone > >> On Jul 14, 2016, at 1:58 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu> wrote: >> >> Hi Zach >> >> check out asegstats2table and aparcstats2table and see if they do what you >> want >> >> cheers >> Bruce >>> On Thu, 14 Jul 2016, Zachariah Holub wrote: >>> >>> I have run various batches of freesurfer on our MRI scans. Now I want to >>> take many of the stats files from all of our subjects and export them to one >>> giant excel document. I would like to have a separate sheet for each kind of >>> statistic (i.e. Sheet1=LH aparc.2009a; Sheet2=RH aparc.2009a; Sheet3=LH DKT >>> etc...) and then have all of the subjects for that statistic type be >>> included in the appropriate, single sheet. >>> Is there a program that you are aware of that I can use to export the stat >>> files to excel? I would greatly appreciate any insight or help you can offer >>> as it is taking me forever to do this by simply copy and paste. >>> Thank you in advance, >>> Zach >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to whom it is >> addressed. If you believe this e-mail was sent to you in error and the e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you in >> error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
