You should use aparc+aseg.mgz and set the --projfrac 0.5. This should produce something with the same information as the ?h.aparc.annot (though the color scale will be different)
On 09/30/2016 03:51 PM, Crawford, Anna wrote: > I was just using the wmparc as an example to get a volume overlay onto the > surface. I chose that one just to see the parcellated surface similar to the > volume. > ________________________________________ > From: freesurfer-boun...@nmr.mgh.harvard.edu > [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Douglas N Greve > [gr...@nmr.mgh.harvard.edu] > Sent: Friday, September 30, 2016 3:41 PM > To: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] Volume to Surface > > I can't tell from that image if it is right. Why are you mapping the > wmparc to the surface? The wmparc will have segmentation boundaries > right at the surface, so the actual value there will be unpredicatable. > > > On 09/30/2016 03:31 PM, Crawford, Anna wrote: >> Thank you everyone for your help! I do have a follow up question. I believe >> this did what I wanted and is what I will want to do for PET data for >> example. When I did the wmparc to the surface, I was expecting to see the >> different areas mapped out similar to the volume. I have attached a screen >> capture of what it looks like. Can someone confirm that this seems to be >> correct and I was just expecting the wrong thing? I suspect this is the case >> since to see the different areas in the volume you use the look up table for >> the color map and that is not an option for the surface overlay. >> >> Thank you all again for your feedback! >> >> Anna >> ________________________________________ >> From: freesurfer-boun...@nmr.mgh.harvard.edu >> [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Douglas N Greve >> [gr...@nmr.mgh.harvard.edu] >> Sent: Friday, September 30, 2016 2:42 PM >> To: freesurfer@nmr.mgh.harvard.edu >> Subject: Re: [Freesurfer] Volume to Surface >> >> Anna, try removing --out_type paint and instead specify the output file >> as wmparcSlh.mgh >> >> Trisanna, thanks so much for chipping in! >> >> >> >> On 09/30/2016 01:14 PM, Trisanna Sprung-Much wrote: >>> Ok so this is where my knowledge might be limited because you did a >>> slightly different thing than me by specifying the output type as >>> "paint" - that is what the .w format is. This is a label, I believe >>> and needs to be loaded as such. >>> >>> What happens if you try to remove the "output_type" and try to load >>> the result as an overlay? >>> >>> -- >>> Ph.D. Candidate >>> McGill University >>> Integrated Program in Neuroscience >>> Psychology >>> >>> >>> On Fri, Sep 30, 2016 at 1:00 PM, Crawford, Anna <crawf...@ccf.org >>> <mailto:crawf...@ccf.org>> wrote: >>> >>> Thank you! So good news, that worked and created wmparcSlh.w >>> >>> I'm not sure what the .w means. When I try to load it onto the >>> surface, I get an error: "Failed to load Surface overlay." >>> >>> Thank you, >>> Anna >>> >>> ------------------------------------------------------------------------ >>> *From:* freesurfer-boun...@nmr.mgh.harvard.edu >>> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu> >>> [freesurfer-boun...@nmr.mgh.harvard.edu >>> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu>] on behalf of >>> Trisanna Sprung-Much [trisanna.sprung-m...@mail.mcgill.ca >>> <mailto:trisanna.sprung-m...@mail.mcgill.ca>] >>> *Sent:* Friday, September 30, 2016 12:51 PM >>> >>> *To:* Freesurfer support list >>> *Subject:* Re: [Freesurfer] Volume to Surface >>> >>> My apologies, I meant "--regheader subject" >>> >>> -- >>> Ph.D. Candidate >>> McGill University >>> Integrated Program in Neuroscience >>> Psychology >>> >>> >>> On Fri, Sep 30, 2016 at 12:46 PM, Crawford, Anna <crawf...@ccf.org >>> <mailto:crawf...@ccf.org>> wrote: >>> >>> Yeah, I get Error: Option unknown for --regmethod >>> >>> Anna >>> >>> ------------------------------------------------------------------------ >>> *From:* freesurfer-boun...@nmr.mgh.harvard.edu >>> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu> >>> [freesurfer-boun...@nmr.mgh.harvard.edu >>> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu>] on behalf of >>> Trisanna Sprung-Much [trisanna.sprung-m...@mail.mcgill.ca >>> <mailto:trisanna.sprung-m...@mail.mcgill.ca>] >>> *Sent:* Friday, September 30, 2016 12:41 PM >>> >>> *To:* Freesurfer support list >>> *Subject:* Re: [Freesurfer] Volume to Surface >>> >>> hmmm, yup not sure there. Did you try "--regmethod subject" >>> >>> -- >>> Ph.D. Candidate >>> McGill University >>> Integrated Program in Neuroscience >>> Psychology >>> >>> >>> On Fri, Sep 30, 2016 at 12:14 PM, Crawford, Anna >>> <crawf...@ccf.org <mailto:crawf...@ccf.org>> wrote: >>> >>> Just to make sure I am actually doing what you are >>> suggesting my input and output is below. >>> >>> Thanks, >>> Anna >>> >>> mri_vol2surf --src >>> >>> /mnt/netScratch/crawforda/BrainStem/study11074/S2sdt/segfs/mri/wmparc.mgz >>> --out >>> >>> /mnt/netScratch/crawforda/BrainStem/study11074/S2sdt/segfs/surf/wmparcSlh >>> --reg >>> >>> /mnt/netScratch/crawforda/BrainStem/study11074/S2sdt/segfs/surf/lh.sphere.reg >>> --hemi lh --surf white --out_type paint >>> INFO: output format is paint >>> srcvol = >>> >>> /mnt/netScratch/crawforda/BrainStem/study11074/S2sdt/segfs/mri/wmparc.mgz >>> srcreg = >>> >>> /mnt/netScratch/crawforda/BrainStem/study11074/S2sdt/segfs/surf/lh.sphere.reg >>> srcregold = 0 >>> srcwarp unspecified >>> surf = white >>> hemi = lh >>> reshape = 0 >>> interp = nearest >>> float2int = round >>> GetProjMax = 0 >>> INFO: float2int code = 0 >>> INFO: changing type to float >>> Done loading volume >>> regio_read_register(): Success >>> Error reading inplaneres from >>> >>> /mnt/netScratch/crawforda/BrainStem/study11074/S2sdt/segfs/surf/lh.sphere.reg >>> >>> ------------------------------------------------------------------------ >>> *From:* freesurfer-boun...@nmr.mgh.harvard.edu >>> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu> >>> [freesurfer-boun...@nmr.mgh.harvard.edu >>> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu>] on behalf >>> of Trisanna Sprung-Much >>> [trisanna.sprung-m...@mail.mcgill.ca >>> <mailto:trisanna.sprung-m...@mail.mcgill.ca>] >>> *Sent:* Friday, September 30, 2016 12:08 PM >>> >>> *To:* Freesurfer support list >>> *Subject:* Re: [Freesurfer] Volume to Surface >>> >>> Did you try --regmethod subjid? or --reg sphere.reg ? >>> >>> If that doesn't work then I'm not sure how to help - Bruce >>> or Doug, any thoughts? >>> >>> Trisanna >>> >>> -- >>> Ph.D. Candidate >>> McGill University >>> Integrated Program in Neuroscience >>> Psychology >>> >>> >>> On Fri, Sep 30, 2016 at 11:22 AM, Crawford, Anna >>> <crawf...@ccf.org <mailto:crawf...@ccf.org>> wrote: >>> >>> I am still having problems. If I do --reg subject I >>> get an error back that it is a directory. If I pick a >>> specific file such as orig.mgz (default according to >>> help file), I get the same error as before. >>> >>> Thanks, >>> Anna >>> >>> ------------------------------------------------------------------------ >>> *From:* freesurfer-boun...@nmr.mgh.harvard.edu >>> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu> >>> [freesurfer-boun...@nmr.mgh.harvard.edu >>> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu>] on >>> behalf of Trisanna Sprung-Much >>> [trisanna.sprung-m...@mail.mcgill.ca >>> <mailto:trisanna.sprung-m...@mail.mcgill.ca>] >>> *Sent:* Friday, September 30, 2016 11:04 AM >>> >>> *To:* Freesurfer support list >>> *Subject:* Re: [Freesurfer] Volume to Surface >>> >>> Gotcha, so when I was trying to do something similar I >>> used mri_vol2surf with --regmethod subjid since you >>> don't actually want to perform a transformation. >>> >>> Maybe try that? >>> >>> Trisanna >>> >>> -- >>> Ph.D. Candidate >>> McGill University >>> Integrated Program in Neuroscience >>> Psychology >>> >>> >>> On Fri, Sep 30, 2016 at 10:54 AM, Crawford, Anna >>> <crawf...@ccf.org <mailto:crawf...@ccf.org>> wrote: >>> >>> No problem. I'm not exactly sure, but I think I >>> just want a surface overlay so mri_vol2surf would >>> be what I want. Right now, I am just trying to get >>> down the generic way of how to do it which is why >>> I went with trying to overlay the parcellation >>> onto the inflated surface. Later, I will have >>> different modalities such as PET that I will want >>> to overlay on the inflated surface that will >>> already be registered to the MRI. So I just wanted >>> to get the proper workflow of how to get a volume >>> overlayed onto the surface if that makes sense. >>> >>> Thank you, >>> Anna >>> >>> ------------------------------------------------------------------------ >>> *From:* freesurfer-boun...@nmr.mgh.harvard.edu >>> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu> >>> [freesurfer-boun...@nmr.mgh.harvard.edu >>> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu>] >>> on behalf of Trisanna Sprung-Much >>> [trisanna.sprung-m...@mail.mcgill.ca >>> <mailto:trisanna.sprung-m...@mail.mcgill.ca>] >>> *Sent:* Friday, September 30, 2016 10:48 AM >>> >>> *To:* Freesurfer support list >>> *Subject:* Re: [Freesurfer] Volume to Surface >>> >>> Sorry - always helps to read the whole question :D >>> >>> So, you are trying to create an inflated white >>> surface? As far as I know this doesn't exist. >>> Freesurfer creates white surfaces, pial surfaces, >>> and inflated surfaces that are the pial pushed >>> outwards. >>> >>> Also, "mri_vol2surf" creates surface overlays on >>> surfaces that already exist. >>> >>> Trisanna >>> >>> -- >>> Ph.D. Candidate >>> McGill University >>> Integrated Program in Neuroscience >>> Psychology >>> >>> >>> On Fri, Sep 30, 2016 at 10:44 AM, Crawford, Anna >>> <crawf...@ccf.org <mailto:crawf...@ccf.org>> wrote: >>> >>> I already ran recall-all. I am trying to >>> create a different surface not created using >>> recon-all. >>> >>> Anna >>> >>> ------------------------------------------------------------------------ >>> *From:* freesurfer-boun...@nmr.mgh.harvard.edu >>> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu> >>> [freesurfer-boun...@nmr.mgh.harvard.edu >>> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu>] >>> on behalf of Trisanna Sprung-Much >>> [trisanna.sprung-m...@mail.mcgill.ca >>> <mailto:trisanna.sprung-m...@mail.mcgill.ca>] >>> *Sent:* Friday, September 30, 2016 10:40 AM >>> *To:* Freesurfer support list >>> *Subject:* Re: [Freesurfer] Volume to Surface >>> >>> You have to run recon-all to get the surfaces >>> of a volume. >>> >>> Trisanna >>> >>> -- >>> Ph.D. Candidate >>> McGill University >>> Integrated Program in Neuroscience >>> Psychology >>> >>> >>> On Fri, Sep 30, 2016 at 9:47 AM, Crawford, >>> Anna <crawf...@ccf.org >>> <mailto:crawf...@ccf.org>> wrote: >>> >>> Hello, >>> >>> I am trying to take nay volume that is >>> registered and create an inflated surface. >>> I am trying to use mri_vol2surf. I am >>> having problems with the registration >>> source. From the examples I could fine, it >>> should be --srcreg *.dat. The only *.dat >>> file I have is segment.dat which does not >>> work. I also tried using the white matter >>> volume which also didn't work. My input >>> and output is below. Could you offer some >>> guidance on the registration file? >>> >>> Thank you, >>> Anna >>> >>> mri_vol2surf --src >>> >>> /mnt/netScratch/crawforda/BrainStem/study11074/S2sdt/segfs/mri/wmparc.mgz >>> --out >>> >>> /mnt/netScratch/crawforda/BrainStem/study11074/S2sdt/segfs/surf/wmparcSlh >>> --srcreg >>> >>> /mnt/netScratch/crawforda/BrainStem/study11074/S2sdt/segfs/mri/segment.dat >>> --hemi lh --surf white --out_type paint >>> INFO: output format is paint >>> srcvol = >>> >>> /mnt/netScratch/crawforda/BrainStem/study11074/S2sdt/segfs/mri/wmparc.mgz >>> srcreg = >>> >>> /mnt/netScratch/crawforda/BrainStem/study11074/S2sdt/segfs/mri/segment.dat >>> srcregold = 0 >>> srcwarp unspecified >>> surf = white >>> hemi = lh >>> reshape = 0 >>> interp = nearest >>> float2int = round >>> GetProjMax = 0 >>> INFO: float2int code = 0 >>> INFO: changing type to float >>> Done loading volume >>> regio_read_register(): Success >>> Error reading betplaneres from >>> >>> /mnt/netScratch/crawforda/BrainStem/study11074/S2sdt/segfs/mri/segment.dat >>> >>> =================================== >>> >>> Please consider the environment before >>> printing this e-mail >>> >>> Cleveland Clinic is ranked as one of the >>> top hospitals in America by U.S.News & >>> World Report (2015). 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If you have received this >>> communication in error, please contact the >>> sender immediately and destroy the material in >>> its entirety, whether electronic or hard copy. >>> Thank you. >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> <mailto:Freesurfer@nmr.mgh.harvard.edu> >>> >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> >>> >>> >>> The information in this e-mail is intended >>> only for the person to whom it is >>> addressed. If you believe this e-mail was sent >>> to you in error and the e-mail >>> contains patient information, please contact >>> the Partners Compliance HelpLine at >>> http://www.partners.org/complianceline >>> <http://www.partners.org/complianceline> . 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Thank you. >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> <mailto:Freesurfer@nmr.mgh.harvard.edu> >>> >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> >>> >>> >>> The information in this e-mail is intended only for >>> the person to whom it is >>> addressed. If you believe this e-mail was sent to you >>> in error and the e-mail >>> contains patient information, please contact the >>> Partners Compliance HelpLine at >>> http://www.partners.org/complianceline >>> <http://www.partners.org/complianceline> . If the >>> e-mail was sent to you in error >>> but does not contain patient information, please >>> contact the sender and properly >>> dispose of the e-mail. >>> >>> >>> =================================== >>> >>> Please consider the environment before printing this e-mail >>> >>> Cleveland Clinic is ranked as one of the top hospitals in >>> America by U.S.News & World Report (2015). Visit us online >>> at http://www.clevelandclinic.org for a complete listing >>> of our services, staff and locations. Confidentiality >>> Note: This message is intended for use only by the >>> individual or entity to which it is addressed and may >>> contain information that is privileged, confidential, and >>> exempt from disclosure under applicable law. If the reader >>> of this message is not the intended recipient or the >>> employee or agent responsible for delivering the message >>> to the intended recipient, you are hereby notified that >>> any dissemination, distribution or copying of this >>> communication is strictly prohibited. If you have received >>> this communication in error, please contact the sender >>> immediately and destroy the material in its entirety, >>> whether electronic or hard copy. Thank you. >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> <mailto:Freesurfer@nmr.mgh.harvard.edu> >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> >>> >>> >>> The information in this e-mail is intended only for the >>> person to whom it is >>> addressed. If you believe this e-mail was sent to you in >>> error and the e-mail >>> contains patient information, please contact the Partners >>> Compliance HelpLine at >>> http://www.partners.org/complianceline >>> <http://www.partners.org/complianceline> . If the e-mail >>> was sent to you in error >>> but does not contain patient information, please contact >>> the sender and properly >>> dispose of the e-mail. >>> >>> >>> =================================== >>> >>> Please consider the environment before printing this e-mail >>> >>> Cleveland Clinic is ranked as one of the top hospitals in >>> America by U.S.News & World Report (2015). Visit us online at >>> http://www.clevelandclinic.org for a complete listing of our >>> services, staff and locations. Confidentiality Note: This >>> message is intended for use only by the individual or entity >>> to which it is addressed and may contain information that is >>> privileged, confidential, and exempt from disclosure under >>> applicable law. If the reader of this message is not the >>> intended recipient or the employee or agent responsible for >>> delivering the message to the intended recipient, you are >>> hereby notified that any dissemination, distribution or >>> copying of this communication is strictly prohibited. If you >>> have received this communication in error, please contact the >>> sender immediately and destroy the material in its entirety, >>> whether electronic or hard copy. Thank you. >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> <mailto:Freesurfer@nmr.mgh.harvard.edu> >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> >>> >>> >>> The information in this e-mail is intended only for the person >>> to whom it is >>> addressed. If you believe this e-mail was sent to you in error >>> and the e-mail >>> contains patient information, please contact the Partners >>> Compliance HelpLine at >>> http://www.partners.org/complianceline >>> <http://www.partners.org/complianceline> . If the e-mail was >>> sent to you in error >>> but does not contain patient information, please contact the >>> sender and properly >>> dispose of the e-mail. >>> >>> >>> =================================== >>> >>> Please consider the environment before printing this e-mail >>> >>> Cleveland Clinic is ranked as one of the top hospitals in America >>> by U.S.News & World Report (2015). Visit us online at >>> http://www.clevelandclinic.org for a complete listing of our >>> services, staff and locations. Confidentiality Note: This message >>> is intended for use only by the individual or entity to which it >>> is addressed and may contain information that is privileged, >>> confidential, and exempt from disclosure under applicable law. If >>> the reader of this message is not the intended recipient or the >>> employee or agent responsible for delivering the message to the >>> intended recipient, you are hereby notified that any >>> dissemination, distribution or copying of this communication is >>> strictly prohibited. If you have received this communication in >>> error, please contact the sender immediately and destroy the >>> material in its entirety, whether electronic or hard copy. Thank you. >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> >>> >>> >>> The information in this e-mail is intended only for the person to >>> whom it is >>> addressed. If you believe this e-mail was sent to you in error and >>> the e-mail >>> contains patient information, please contact the Partners >>> Compliance HelpLine at >>> http://www.partners.org/complianceline >>> <http://www.partners.org/complianceline> . If the e-mail was sent >>> to you in error >>> but does not contain patient information, please contact the >>> sender and properly >>> dispose of the e-mail. >>> >>> >>> >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> -- >> Douglas N. Greve, Ph.D. >> MGH-NMR Center >> gr...@nmr.mgh.harvard.edu >> Phone Number: 617-724-2358 >> Fax: 617-726-7422 >> >> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 >> www.nmr.mgh.harvard.edu/facility/filedrop/index.html >> Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> =================================== >> >> >> Please consider the environment before printing this e-mail >> >> Cleveland Clinic is ranked as one of the top hospitals in America by >> U.S.News & World Report (2015). >> Visit us online at http://www.clevelandclinic.org for a complete listing of >> our services, staff and locations. >> >> >> Confidentiality Note: This message is intended for use only by the >> individual or entity to which it is addressed and may contain information >> that is privileged, confidential, and exempt from disclosure under >> applicable law. If the reader of this message is not the intended recipient >> or the employee or agent responsible for delivering the message to the >> intended recipient, you are hereby notified that any dissemination, >> distribution or copying of this communication is strictly prohibited. If >> you have received this communication in error, please contact the sender >> immediately and destroy the material in its entirety, whether electronic or >> hard copy. >> >> Thank you. >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > =================================== > > > Please consider the environment before printing this e-mail > > Cleveland Clinic is ranked as one of the top hospitals in America by U.S.News > & World Report (2015). > Visit us online at http://www.clevelandclinic.org for a complete listing of > our services, staff and locations. > > > Confidentiality Note: This message is intended for use only by the > individual or entity to which it is addressed and may contain information > that is privileged, confidential, and exempt from disclosure under applicable > law. If the reader of this message is not the intended recipient or the > employee or agent responsible for delivering the message to the intended > recipient, you are hereby notified that any dissemination, distribution or > copying of this communication is strictly prohibited. If you have received > this communication in error, please contact the sender immediately and > destroy the material in its entirety, whether electronic or hard copy. > > Thank you. > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer