Hello FreeSurfer Developers, I'm running the recon-all on my subjects data as described in freesurfer tutorial (https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial), but it shows the following error when I run the recon-all command:
ERROR: cannot find CON_101.nii recon-all -s exited with ERRORS I've tried so many times but still shows same errors. Does anyone have any thoughts on how to trouble-shoot this one? Also, Ive attached the recon-all.log in case it's of any use. 1) FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0 2) Platform: Red Hat Enterprise Linux 7 3) uname -a: Linux lcmodel 3.10.0-327.el7.x86_64 #1 SMP Thu Oct 29 17:29:29 EDT 2015 x86_64 x86_64 x86_64 GNU/Linux 4) recon-all.log: see attached Regards *Sadhana Singh, PhD * *Postdoctoral Researcher* *Departments of Anesthesiology * *David Geffen School of Medicine at UCLA * *University of California at Los Angeles * *Los Angeles, CA, USA* *Phone No: 424-270-4940 * *Email: sadhanasi...@mednet.ucla.edu <sadhanasi...@mednet.ucla.edu> *
Recon
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