Hi Veronica
it's because you are mixing versions. Can you rerun your subject with
6.0 from scratch?
cheers
Bruce
On Tue, 21 Mar 2017, Veronica Munoz wrote:
Dear all,
I'm trying to add FLAIR data to a subject. I did the first ("classic")
recon-all on a platform so I get the following warnings:
INFO: FreeSurfer build stamps do not match
Subject Stamp: freesurfer-Linux-centos4_x86_64-stable-pub-v5.3.0
Current Stamp: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c
INFO: current FREESURFER_HOME does not match that of previous processing.
Current: /home/munoz/Documents/freesurfer
Previous:/tmp/wrk/DIRAC_piXnbapilot/50587390/recon-all.sh-445574845579047/freesurfer
Then recon all exits with the following error:
#@# Jacobian white lh Tue Mar 21 12:25:24 CET 2017
/media/sf_C_DRIVE/Users/munoz/Documents/Stage_FLI/results/FLAIRtest/AC_005/
scripts
mris_jacobian ../surf/lh.white.preaparc ../surf/lh.sphere.reg
../surf/lh.jacobian_white
reading surface from ../surf/lh.white.preaparc...
MRISread(../surf/lh.white.preaparc): could not open file
No such file or directory
mris_jacobian: could not read surface file ../surf/lh.white.preaparc
No such file or directory
Linux iu-dv-464-vm.creatis.insa-lyon.fr 4.9.7-201.fc25.x86_64 #1 SMP Thu Feb
2 23:32:42 UTC 2017 x86_64 x86_64 x86_64 GNU/Linux
Does this have something to do with my current Freesurfer version ? I don't
really know what information does "preaparc" contain.
Thank you for your help.
Best regards,
Veronica
veronica.mu...@creatis.insa-lyon.fr
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