copy it to $FREESURFER_HOME/bin and then
chmod a+x mris_apply_reg
then
rehash
On 3/21/17 8:23 AM, Marissa Pifer wrote:
Hi Doug,
I'm not sure how to use this binary. Do I need to install it?
Marissa
On Fri, Mar 17, 2017 at 12:23 PM, Douglas N Greve
<gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu>> wrote:
Are you using v5.3? You will need a version 6. You can get this binary
for v6 here
https://gate.nmr.mgh.harvard.edu/safelinks/greve/mris_apply_reg
<https://gate.nmr.mgh.harvard.edu/safelinks/greve/mris_apply_reg>
On 03/17/2017 11:47 AM, Marissa Pifer wrote:
>
> Marcs-MacBook-Pro:SRMC01-1 marchaut$ mris_apply_reg --src-label
> label/rh.V1_exvivo.thresh.label --trg
rh-on-lh.V1_exvivo.thresh.label
> --streg xhemi/surf/lh.fsaverage_sym.sphere.reg
> surf/lh.fsaverage_sym.sphere.reg
>
> ERROR: Option --src-label unknown
>
>
>
> On Fri, Mar 17, 2017 at 11:26 AM, Douglas Greve
> <gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu>
<mailto:gr...@nmr.mgh.harvard.edu
<mailto:gr...@nmr.mgh.harvard.edu>>> wrote:
>
> please send command line
>
>
> On 3/17/17 10:38 AM, Marissa Pifer wrote:
>> Hi freesurfers,
>>
>> I am using xhemi to map the right hemisphere of each subject to
>> the left hemisphere of the same subject. The first xhemi
command
>> works fine, but the 2nd step for mapping the label, I get this
>> error: "Option --src-label unknown"
>>
>> Do you know how to fix this?
>>
>> Marissa
>>
>>
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>
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> The
> information in this e-mail is intended only for the person
to whom
> it is addressed. If you believe this e-mail was sent to you in
> error and the e-mail contains patient information, please
contact
> the Partners Compliance HelpLine at
> http://www.partners.org/complianceline
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--
Douglas N. Greve, Ph.D.
MGH-NMR Center
gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu>
Phone Number: 617-724-2358 <tel:617-724-2358>
Fax: 617-726-7422 <tel:617-726-7422>
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
Outgoing:
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
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The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
