Dear Dr Bruce,
Thank you very much for the quick response.
Topup works for DTI and I am wondering if it works for the T1 images.
Thanks again!
John
> -------- Original Message --------
> Subject: Re: [Freesurfer] susceptibility-induced distortions
> Local Time: August 7, 2017 1:54 PM
> UTC Time: August 7, 2017 5:54 PM
> From: [email protected]
> To: John Anderson <[email protected]>, Freesurfer support list
> <[email protected]>
> Hi John
> I think the FSL group has some nice tools to fix these distortions either
> with or without field maps (topup for example)
> cheers
> Bruce
> On Mon, 7 Aug 2017, John
> Anderson wrote:
>> Dear Freesurfer experts,
>> I want to inquire if there are any tools or any methods to improve T1 images
>> which has "susceptibility-induced distortions" - attached an example.
>>
>> I need to fix these distortions outside the brain. In the mouth area and I
>> am wondering what is the best approach to deal with it and fix it.
>>
>> I highly appreciate any help
>> John
>>
>>
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