External Email - Use Caution Hi Carme, In case of MEX file errors, I think you need to have the compilers (Fortran and C). Check what suits your version the most. Cheers, Fereshte
On Fri, Sep 21, 2018 at 12:33 PM Carme Uribe Codesal <carme.ur...@gmail.com> wrote: > External Email - Use Caution > > Dear FreeSurfer users, > > I am trying to run the Thalamic nuclei and the hippocampal/amygdala > segmentation scripts but there is an error with the matlab license. > The error message is: > > LD_LIBRARY_PATH is > .:/nas01/users/carme/freesurfer/MCRv84//runtime/glnxa64:/nas01/users/carme/freesurfer/MCRv84//bin/glnxa64:/nas01/users/carme/freesurfer/MCRv84//sys/os/glnxa64:/nas01/users/carme/freesurfer/MCRv84//sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/nas01/users/carme/freesurfer/MCRv84//sys/java/jre/glnxa64/jre/lib/amd64/server:/nas01/users/carme/freesurfer/MCRv84//sys/java/jre/glnxa64/jre/lib/amd64/client:/nas01/users/carme/freesurfer/MCRv84//sys/java/jre/glnxa64/jre/lib/amd64:/usr/libexec/NX3/lib64/Xinerama:/usr/lib/nx/X11 > Invalid MEX-file > '/tmp/MCR_714808722/.mcrCache8.4/Segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2/bin/kvlGEMSMatlab.mexa64': > /lib64/libc.so.6: version `GLIBC_2.14' not found (required by > /tmp/MCR_714808722/.mcrCache8.4/Segmen0/autofs/space/panamint_005/users/iglesias/software/freesurfer.GEMS2/bin/kvlGEMSMatlab.mexa64) > > Error in kvlClear (line 11) > > Error in SegmentThalamicNuclei (line 203) > > MATLAB:invalidMEXFile > > Thanks! > > Carme Uribe > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. >
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