I have not. Can you send the recon-all.log file? On 2/1/19 6:01 PM, Morgan Botdorf wrote: > > External Email - Use Caution > > Dear all, > > I recently ran recon-all on data using the T2pial flag to improve the > pial surface (using version 6.0). The T2 images seemed to improve the > pial surfaces; however, when I extract stats using the Destrieux > atlas, I get zero values for several regions and for > BrainSegVolNotVent and eTIV. If I run recon-all without the T2 image, > I get data for these regions, BrainSegVolNotVent, and eTIV. Has anyone > run into similar issues using the T2pial flag or have an idea of what > may be causing this problem? > > Thank you in advance for your help! > > Morgan > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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