Can you run
ls -l $FREESURFER_HOME/bin/mri_aparc2aseg $FREESURFER_HOME/bin/make_average_subject
and send the result?

Also, the result of
which mri_aparc2aseg
which make_average_subject



On 3/17/2021 8:36 PM, Jordan Mullins wrote:

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Yes, I had seen that report and had downloaded the patch, but still got the same error. Are there any other steps I can take?

On Wed, Mar 17, 2021 at 2:59 PM Douglas N. Greve <dgr...@mgh.harvard.edu <mailto:dgr...@mgh.harvard.edu>> wrote:

    This problem is documented (along with a fix) on our release notes
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    On 3/16/2021 3:39 PM, Jordan Mullins wrote:

            External Email - Use Caution

    Yes, I used the make_average_subject command. I've attached a
    text file below of the command line and terminal output from my
    attempt to average two subjects. I get the same error when I try
    this with the full sample.

    On Tue, Mar 16, 2021 at 9:12 AM Douglas N. Greve
    <dgr...@mgh.harvard.edu <mailto:dgr...@mgh.harvard.edu>> wrote:

        What command are you using? make_average_subject? Send the
        command line and terminal output

        On 3/10/2021 3:53 PM, Jordan Mullins wrote:

                External Email - Use Caution

        Hello,

        I am trying to create an average subject from a set of
        subjects, but keep getting an error that says
        "mghRead(mri/norm.mgz, -1): could not open file". I've read
        that several others have solved this issue by installing the
        patch available at *MailScanner has detected a possible
        fraud attempt from "secure-web.cisco.com" claiming to be*
        http://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.0-patch/
        
<http://secure-web.cisco.com/1holHARxUGo27ZLvlj5vX0sbezsRgmRaNdE1T-Z728EASqGjdSamQfU6_udvX8lNDAGu6fMmZJqlcAAuJtuijJsAYfi7M55moSpWy1McHpeqmMGAqqWT-7M-IStYk9Qs2pOnTfoJznpdLsEgVASogVifdHzPfK1t3pQowp_WCXSDaaHhTDzz7qCl-DUbTHTPKKgBhR1NruBOW9_7sIsS86UbWXqE7CaL5hUOQNwrRGh4iX37y5CgC4I9HuJDYQNG_3fPAfLJmyVuWMB5QC4E_jw/http%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Fpub%2Fdist%2Ffreesurfer%2F6.0.0-patch%2F>.
        I did this, but continue to get the same error. I'm working
        with Freesurver Version 6.0.0 and MacOS Big Sur Version
        11.2.3. I've attached the recon-all.log below, but please
        let me know if you need additional information.

        Any insight on this would be appreciated! Thank you!

        Jordan

-- *Jordan L. Mullins, B.A.*
        Doctoral Student, Department of Psychology
        University of California, Riverside
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-- *Jordan L. Mullins, B.A.*
    Doctoral Student, Department of Psychology
    University of California, Riverside
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--
*Jordan L. Mullins, B.A.*
Doctoral Student, Department of Psychology
University of California, Riverside
*MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* http://ucrkindlab.com <http://secure-web.cisco.com/1Hb5eBrObpHBXZQD2S7ILWEKBRwR7OK46HlRQPn5nJhb1RK-RjdWkJcRfRQ7GXWEg-inGg35_0zu6O99dGJj3Y8PD_juHovVy61Q0FdPx7DqeUdDfAzy_bx4T2i8AtjXYITBt1FTsolPdZrS1JpBSWgnGw-BigkMI1kVhbHJ6nXXolmhIlo9OSpWZpwiDnGkpJgvXuWSpE8G08RHw6izT-f7A09E9Xdfooja5o0AyNaUZ6JfixfKFSdx_Xtr5JP3Ge38Kd3xiqliWRnmLLhvInw/http%3A%2F%2Fucrkindlab.com>


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