External Email - Use Caution Hi FreeSurfer Developers,
I am attempting to preprocess an MRI dataset from openNeuron (https://secure-web.cisco.com/1gIJP2mF3Wi7wH11qND5JcpOLf0L9TMXaosz2-5tAHaON_bwAKEMcaOxWA9yN-EQrbYOg6okc4hX9U0jGF6p7T-QGLCtpzDElKPz4wtssp9dYx2dNdiX61lfmDF2lhKRPmVJ9ZltCQTSRg-jNoQ1yTs4vfb8fjRHNrY6LqsjB0oP_KCeJ59EiOKk_5kvZ9nMT201-9fTdFFbqQqZOMgkpShQF57OdFXSKG7XDuQarOEBwRqPQMgdh_p7g_ePgDkkPBg8W-dnC1tmnsdMB9ArM-HuURLuJtBvDZLGxT9cTcstB3D5oXB1tPdaDkS2zSpWN/https%3A%2F%2Fopenneuro.org%2Fdatasets%2Fds002748%2Fversions%2F1.0.5) with fMRIprep docker, ver. 22.0.1. An error occurred when running FreeSurfer pipeline. 1) FreeSurfer version: The very version in the docker. 2) Platform: Ubuntu 20.0.4 LTS. 3) uname -a: Linux lqj-workstation 5.15.0-48-generic #54~20.04.1-ubuntu SMP Thu Sep 1 16:17:26 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux. 4) recon-all-rh.log: please see attached. Any ideas about this error? Thanks in advance. All the best, Qunjun
recon-all-rh.log
Description: Binary data
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline <https://www.massgeneralbrigham.org/complianceline> . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
