Does this happen on every volume or just with this one. If just this
one, then it is probably a problem with the volume itself and not the code
On 1/25/2023 9:15 PM, Siamak Sorooshyari wrote:
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Dear FreeSurfer,
I am using the FieldTrip software to process MEG data, it involves my
using the function ft_read_mri() in MATLAB to read in the anatomical
MRI file.
I have tried feeding into this function a .nii.gz as well as the
unzipped .nii version.
In the latter case I get an error:
ERROR: D:\...\anat\sub-0249_ses-01_run-1_T1w.nii, read in 21626880
voxels, expected 10813440
I contacted the FieldTrip folks and they mentioned that it's a
FreeSurfer issue. I think I've isolated the issue to the load_nifti.m
file with the "nitemsread" variable and "nvoxels" variables not
matching in value. I am not clear why this would happen, how can this
be fixed?
Best,
Siamak
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