Hi Curtis,
setup.sh has been removed from the installation process, as discussed in
this thread:
http://lists.bx.psu.edu/pipermail/galaxy-dev/2011-March/004588.html

On Wed, Mar 9, 2011 at 2:12 PM, Curt Palm <cp...@stanford.edu> wrote:

> I just cloned the current release version of  galaxy:
>
> hg clone http://bitbucket.org/galaxy/galaxy-dist
>
> and can not run setup.sh because it is not present in  the /galaxy-dist/
> directory.
>
> setup.sh is also not listed on the
> https://bitbucket.org/galaxy/galaxy-dist/src   page,
>
> is this an error or has the installation process changed?
>
> thanks
>
> *******************************************************
> Curtis J. Palm             cp...@stanford.edu
> Stanford Genome Technology Center
>
> MC:  8307
> office: 650-812-1994        cell: 408 858-7849
> *******************************************************
>
>
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