Dear all,

I have a problem with galaxy and I have already tried to write on ther user
list....
My problem concern the upload on galaxy of new files.

We are setting up a galaxy istance on our server (HPC Cluster with torque
and PBS) for internal use.
Our problem is that we manage only NGS data (SOLiD and Illumina Data) that
are already stored on the server.
We tried to set up the user directory in the universe_wgsi.ini file to allow
to any user tu upload their local files, but adding new file and
re-uploading the dir we found duplicated files (it seems that galaxy
re-upload every time all the files ignoring if some are already present).
This method is OK for us but how can we avoid the file duplications ?

In a presentation found on web (blankenberg_pittsburg_2001), we saw that
there is the possibility to automatically upload the sequenced reads on
Galaxy (and let them available to all our user). Where can we find
information for doing this ?


Thank in advance

All the best

Alessandro




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Alessandro Albiero
Bioinformatics Lab
CRIBI-Padua University
Viale G. Colombo, 3
35121 Padova-Italy

http://genomics.cribi.unipd.it
http://genomics.cribi.unipd.it/index.php/User:Albiero
Phone. +39. 049 827-6165
Fax.   +39. 049 827-6159
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