On Nov 2, 2011, at 3:39 PM, Nate Coraor wrote: > Shantanu Pavgi wrote: >> >> Hi, >> >> It seems like modification of 'citation_url' in the universe_wsgi.ini >> config file has no effect in the UI (Help --> How to Cite Galaxy). Is it >> something hard-coded in the source? > > Hi Shantanu, > > Whoops. This has been fixed in 6205:9a9479f7e53f. >
Thanks Nate. I was wondering if 'lib/galaxy/config.py' file needs to be modified as well. {{{ $ hg diff ./lib/galaxy/config.py diff -r 9e90faf2cb1c lib/galaxy/config.py --- a/lib/galaxy/config.py Wed Nov 02 14:15:08 2011 -0700 +++ b/lib/galaxy/config.py Wed Nov 02 16:46:08 2011 -0500 @@ -113,6 +113,7 @@ self.gbrowse_display_sites = kwargs.get( 'gbrowse_display_sites', "wormbase,tair,modencode_worm,modencode_fly,sgd_yeast" ).lower().split(",") self.genetrack_display_sites = kwargs.get( 'genetrack_display_sites', "main,test" ).lower().split(",") self.brand = kwargs.get( 'brand', None ) + self.citation_url = kwargs.get('citation_url', 'http://wiki.g2.bx.psu.edu/Citing%20Galaxy') self.support_url = kwargs.get( 'support_url', 'http://wiki.g2.bx.psu.edu/Support' ) self.wiki_url = kwargs.get( 'wiki_url', 'http://g2.trac.bx.psu.edu/' ) self.blog_url = kwargs.get( 'blog_url', None ) }}} Also, it seems like the default values are being passed twice here - in the mako templates and initialization method of Configuration class. I was wondering if default values can be passed only once during initialization and then other get methods would only query the necessary configuration option. I don't know all the code in detail, so I might be wrong here. -- Shantanu. ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/