Hi Frank, This should be resolved as of changeset 7057:08fbfeaaf3e1. Thanks!
-Dannon On Mar 27, 2012, at 4:37 AM, Frank Sørensen wrote: > Hi Dannon, > > Unfortunately our server is (still) behind a firewall, so I can't share > anything, but I hope you can reproduce the error from the following > description. > > If I make a vanilla test workflow say: > > Input Dataset -> Map with BWA for Illumina (single end) -> SAM-to-BAM -> > flagstat > > and save it. Then all outputs will show if I run it, even if none of the > "snowflakes" are checked which is not logical. It would be better if the > output visibility was checked by default, and the user should actively > de-select the outputs that should be hidden, but that's another matter. > > If I edit the workflow that I just created, and select the output from > flagstat to be visible, then the two other (BWA and SAM-to-BAM) will be > hidden when I run it, which they should be. So far so good... > > If I edit the workflow again and select the remaining outputs (BWA and > SAM-to-BAM) to be visible and save the workflow, then only BWA will be > visible after run, thats a problem, SAM-to-BAM should also be visible since > that's what I selected. > > If I want the output from SAM-to-BAM to be visible, I have to edit the > workflow again, and de-select visibility of the output from SAM-to-BAM, save > the workflow, and re-edit the workflow and select visibility of the output > from SAM-to-BAM and save the workflow. > > It seems that selection/de-selection of output visibility only works under > some circumstances and not others. > > I can conclude the state of the output visibility on the existing or missing > post-hide-action, which is apparent if I select "run workflow", and press > "expand all" on the Running workflow screen, so I don't actually have to run > the workflow, which is a great help. > > By tweaking my workflows using this editing / re-editing method, it is > actually possible to get the visibility of all outputs into the state that I > desire, but it is quite cumbersome on larger workflows. > > Regards > > - Frank ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
