OK, we've made some progress. When we try to do uploads (or, I think,
switch histories from the User->Saved Histories page), we get an error
from get_history in
/www/galaxy.hms.harvard.edu/support/galaxy-dist/lib/galaxy/web/framework/__
init__.py
The code that makes it is:
# Perhaps a bot is running a tool without having logged in to get a
history
log.debug( "Error: this request returned None from
get_history(): %s" % self.request.browser_url )
So either self.galaxy_session.current_history is failing to return
anything, or get_history is being called without create=False at the wrong
time.
Does this help narrow down what might be happening? It's not the FTP
upload; this issue can happen with uploading through the browser, too.
Thanks,
-Amir Karger
>On 10/23/12 2:42 PM, "Karger, Amir" <amir_kar...@hms.harvard.edu> wrote:
>
>>I'm using Galaxy from June, 2012. (Sorry if there's already a fix.)
>>
>>We've got it "working" in production. We've gotten whole pipelines to
>>run.
>>However, we occasionally get situations where we upload file (using the
>>FTP mechanism), which seems to be fine, but then I can't get to the data.
>>I went to Saved Histories, and selected Switch, and it outlined the line
>>in blue and wrote "current history" next to it. But the right pane still
>>shows "Unnamed history" with no data in it. Then if I go back to Saved
>>Histories, I get one or two new Unnamed histories, created within the
>>last
>>few minutes.
>
>
>
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