Hi,
I'm getting errors in the handler logs after upgrading galaxy stable to
today's release.
I specified the "dynamic" job runner as default, which returns a job for
pbs.
These errors appear as soon as the server is up and running. What could
be the issue here?
galaxy.jobs.runners ERROR 2013-04-02 17:24:23,411 Unhandled exception
checking active jobs
Traceback (most recent call last):
File "/galaxy/galaxy-dist/lib/galaxy/jobs/runners/__init__.py", line
336, in monitor
self.check_watched_items()
File "/galaxy/galaxy-dist/lib/galaxy/jobs/runners/pbs.py", line 382,
in check_watched_items
( failures, statuses ) = self.check_all_jobs()
File "/galaxy/galaxy-dist/lib/galaxy/jobs/runners/pbs.py", line 463,
in check_all_jobs
pbs_server_name =
self.__get_pbs_server(pbs_job_state.job_destination.params)
File "/galaxy/galaxy-dist/lib/galaxy/jobs/runners/pbs.py", line 221,
in __get_pbs_server
return job_destination_params['destination'].split('@')[-1]
KeyError: 'destination'
--
Geert Vandeweyer, Ph.D.
Department of Medical Genetics
University of Antwerp
Prins Boudewijnlaan 43
2650 Edegem
Belgium
Tel: +32 (0)3 275 97 56
E-mail: geert.vandewe...@ua.ac.be
http://ua.ac.be/cognitivegenetics
http://www.linkedin.com/pub/geert-vandeweyer/26/457/726
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