Allright. I just pulled in all changesets from stable to my cloud
Galaxy, restarted, and everything works, at first glance.
Thanks for your support!
J
Joachim Jacob
Rijvisschestraat 120, 9052 Zwijnaarde
Tel: +32 9 244.66.34
Bioinformatics Training and Services (BITS)
http://www.bits.vib.be
@bitsatvib
On 05/16/2013 05:21 PM, Dannon Baker wrote:
Sorry, what I was saying was that you *can* pull these changes without
leaving stable using 'hg pull -b stable
http://bitbucket.org/galaxy/galaxy-central'. (Actually, if you're
already on stable the -b is unnecessary -- you'll get the extra
changesets but they won't be activated when you update)
On Thu, May 16, 2013 at 11:08 AM, Joachim Jacob | VIB |
<joachim.ja...@vib.be <mailto:joachim.ja...@vib.be>> wrote:
OK. So I believe I can wait for the next stable release then. I
assume a do not want to go the default branch.
thanks,
Joachim
Joachim Jacob
Rijvisschestraat 120, 9052 Zwijnaarde
Tel: +32 9 244.66.34 <tel:%2B32%209%20244.66.34>
Bioinformatics Training and Services (BITS)
http://www.bits.vib.be
@bitsatvib
On 05/16/2013 05:01 PM, Dannon Baker wrote:
Your instance isn't quite up-to-date enough for the fix --
it's around 9549:47ddf167c9f1 -central / 9452:94caae7433a7
grafted in -stable.
On Thu, May 16, 2013 at 10:56 AM, Joachim Jacob | VIB |
<joachim.ja...@vib.be <mailto:joachim.ja...@vib.be>
<mailto:joachim.ja...@vib.be <mailto:joachim.ja...@vib.be>>>
wrote:
Running the Cloud Galaxy:
galaxy@ip-10-39-130-141:/mnt/galaxyTools/galaxy-central$ hg
summary
parent: 9232:75f09617abaa release_2013.04.01
Merge next-stable to stable for release.
branch: stable
commit: 2 modified, 9 unknown (new branch head)
update: 30 new changesets (update)
galaxy@ip-10-39-130-141:/mnt/galaxyTools/galaxy-central$ hg branch
stable
Our production Galaxy:
[galaxy@galaxy galaxy-dist]$ hg summary
parent: 9292:2cc8d10988e0 security_2013.04.08
controllers/history: use get_history in switch_to_history
branch: stable
commit: 4 modified, 267 unknown (new branch head)
update: 11 new changesets (update)
[galaxy@galaxy galaxy-dist]$ hg branch
stable
Joachim Jacob
Rijvisschestraat 120, 9052 Zwijnaarde
Tel: +32 9 244.66.34 <tel:%2B32%209%20244.66.34>
<tel:%2B32%209%20244.66.34>
Bioinformatics Training and Services (BITS)
http://www.bits.vib.be
@bitsatvib
On 05/16/2013 04:35 PM, Dannon Baker wrote:
I should have read the rest of my email before
replying -- so
you did update Galaxy for your cloud instance. What exact
revision/branch are you running now? There was a
brief period
when select2 was enabled for the workflow page and it
broke
things. This should be fixed in -stable (and, of
course, tip
of -central).
On Thu, May 16, 2013 at 10:12 AM, Joachim Jacob | VIB |
<joachim.ja...@vib.be <mailto:joachim.ja...@vib.be>
<mailto:joachim.ja...@vib.be <mailto:joachim.ja...@vib.be>>
<mailto:joachim.ja...@vib.be
<mailto:joachim.ja...@vib.be> <mailto:joachim.ja...@vib.be
<mailto:joachim.ja...@vib.be>>>>
wrote:
Hi all,
I just found out that I cannot select multiple
inputs in
workflows
anymore in our local Galaxy. This option used to
work on these
workflows in the past. I only get now a dropdown box,
without the
little icon at the top of the input list to select
multiple inputs.
I am a little puzzled of what's wrong. Any light
in the dark?
I have repeated these steps in a freshly started
cloud galaxy
instance, updated to the latest release, and
imported that
workflow. In that instance, I can select multiple
files:
but it is
not anymore with the multiple selection, but in a
'dropdown-checkbox-list' (hope this is clear). The
problem
is here
that only one input gets processed, even the input
list
contains
multiple items. Every item that is checked gets
into the
inputbox.
A second issue is that this entry (already in the
input
list) is
not removed from the checkbox-list: so you can
select multiple
times the same input. (although this might be
wanted in
some cases?)
Thanks,
Joachim
-- Joachim Jacob
Rijvisschestraat 120, 9052 Zwijnaarde
Tel: +32 9 244.66.34 <tel:%2B32%209%20244.66.34>
<tel:%2B32%209%20244.66.34>
<tel:%2B32%209%20244.66.34>
Bioinformatics Training and Services (BITS)
http://www.bits.vib.be
@bitsatvib
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