Dear all,
I updated to the latest Galaxy stable code, and updated the
datatypes_conf.xml.
Trackster displays an error after opening a saved view:
***********************
Error: The requested genome file
(/home/galaxy/galaxy-dist/tool-data/shared/ucsc/chrom/dm3.len) could not
be opened. Exiting!
sort: write failed: standard output: Broken pipe
sort: write error
Couldn't open
/home/galaxy/galaxy-dist/tool-data/shared/ucsc/chrom/dm3.len , No such
file or directory
***********************
In my universe_wsgi.ini I point to the correct directory where I keep my
chrom len files.
# Directory where chrom len files are kept, currently mainly used by
trackster
len_file_path = /mnt/referencedata/trackster
Thanks for any advice,
Cheers,
Joachim
--
Joachim Jacob
Contact details: http://www.bits.vib.be/index.php/about/80-team
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