I noticed this was a problem with the transition to setting metadata externally by default. Return code is completely ignored now (always has been when external metadata setting was enabled). Didn't have time to test the patch, but did post link to one in trello some time ago. On a train without wifi so I cannot find the link, can you apply it and test it out? On Jul 12, 2013 5:07 PM, "Mathieu Bahin" <mathieu.ba...@irisa.fr> wrote:
> Hi all, > > We have a Galaxy instance that we are regularly keeping up to date > following the Galaxy main, so we have the current version (fd4113962c32 > commit). > > For us, since a few updates (unfortunately, I don't know when it started), > the "exit_code" tag is not working anymore. I made the simplest tool to > confirm : > > ---------------- > <tool id="tool_to_come" name="tool_to_come"> > <description></description> > <command interpreter="bash"> > test.sh $input $output > </command> > <inputs> > <param name="input" type="text" value="7" label="Param" /> > </inputs> > <outputs> > <data name="output" format="fasta" label="Output" /> > </outputs> > <stdio> > <exit_code range="12" level="fatal" description="Grave probleme !" /> > </stdio> > <help> > **Tool documentation** > </help> > </tool> > --------------- > #!/bin/bash > > set -e > > if [ "$1" -ne 10 ]; then > exit 12 > else > echo "Yeah !" > $2 > fi > ---------------- > > Anyway, it still doesn't work as it used to... > Am I the only one to have the problem ? Can you help me ? > > Cheers, > Mathieu (Rennes - France) > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > http://lists.bx.psu.edu/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ >
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
