Hi Dave,

> Björn,
> 
> I've uploaded the modified tool_dependencies.xml to devteam's 
> package_emboss_5_0_0 repository on the test tool shed, and verified that 
> it works. Again, thank you for your contributions.

Great, thanks!


>     --Dave B.
> 
> On 7/7/13 18:59:57.000, Björn Grüning wrote:
> > Hi Greg,
> >
> > bitbucket has a downtime so I have attached a patch. I will create
> > tomorrow a pull request if I find time.
> >
> > It will work as described and we have now a new variable (__is64bit__)
> > that we can use to determine if python is running under 64bit (assuming
> > that the rest is also 64bit-ish).
> >
> > Attached is a ported version of emboss as test case (Dave B wrapper).
> >
> > Have a nice evening!
> > Bjoern
> >
> >
> >> Hi Björn,
> >>
> >>
> >> This is great.  A pull request or a patch is fine.  Whatever one is
> >> most convenient for you.  The code doesn't have to be pretty, just
> >> functional.  We can always pretty it up later.
> >>
> >>
> >> Thanks very much for doing this!
> >>
> >>
> >> Greg
> >>
> >> On Jul 7, 2013, at 1:19 PM, Björn Grüning
> >> <bjoern.gruen...@pharmazie.uni-freiburg.de> wrote:
> >>
> >>> Hi Greg,
> >>>
> >>>> Hello Björn,
> >>>>
> >>>> This would be great!  I'm not sure about the type attribute - <action 
> >>>> type="cheetah_command" may be ok, but maybe a more generic type like 
> >>>> <action type="template_command" would be better.
> >>>> I'm not quite sure, so go with what you feel is best.
> >>> I come up with the following:
> >>>
> >>> <action type="template_command">
> >>>      #if env.get('X11_LIB_DIR', False) and env.get('X11_INCLUDE_DIR',
> >>> False):
> >>>             ./configure --prefix=$env.INSTALL_DIR --x-includes=
> >>> $env.X11_INCLUDE_DIR --x-libraries=$env.X11_LIB_DIR
> >>>     #else:
> >>>            ./configure --prefix=$env.INSTALL_DIR
> >>>     #end if
> >>> </action>
> >>>
> >>> $env is the global access point to the env variables and its working
> >>> fine for the few repositories I tested it.
> >>> I had hoped to get it a little bit prettier but fabric and cheetah
> >>> doesn't work well together.
> >>>
> >>> If that is still satisfying I would clean up my code and crea



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