On Wed, Aug 7, 2013 at 5:35 PM, Peter Cock <p.j.a.c...@googlemail.com> wrote: > On Wed, Aug 7, 2013 at 5:11 PM, Bjoern Gruening > <bjoern.gruen...@gmail.com> wrote: >> Hi Peter, >> >>> Now, back in ncbi_blast_plus, I have revised the >>> repository_dependencies.xml to declare this new >>> repository dependency (the revision tag etc is missing >>> to mean the latest version at upload is used): >> >> Mh, I never tried that but I think that will not work. The blast >> datatypes are ok to be included in repository_dependency.xml but the >> package_blast_plus needs to be in tool_dependency.xml, imho. >> >> <?xml version="1.0"?> >> <tool_dependency> >> <package name="blast+" version="2.2.26+"> >> <repository name="package_blast_plus_2_2_26" owner="iuc" /> >> </package> >> </tool_dependency> >> >> If you have that you do not need to change your tools. >> >> Hopefully I'm correct. >> Bjoern > > I think you're right, certainly that is how this example works: > http://toolshed.g2.bx.psu.edu/view/jjohnson/samtools_filter > > So I don't need this in my repository_dependencies.xml > after all...
Trying this out, http://testtoolshed.g2.bx.psu.edu/view/peterjc/ncbi_blast_plus/949fa0294c0d Thanks Peter ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
