On Thu, Oct 17, 2013 at 4:28 PM, Peter Cock <p.j.a.c...@googlemail.com> wrote:
> On Thu, Oct 17, 2013 at 4:05 PM, Eric Rasche <rasche.e...@yandex.ru> wrote:
>> -----BEGIN PGP SIGNED MESSAGE-----
>> Hash: SHA1
>>
>> Peter,
>>
>> On 10/17/2013 07:58 AM, Peter Cock wrote:
>>> On Fri, Oct 4, 2013 at 2:24 PM, Peter Cock <p.j.a.c...@googlemail.com> 
>>> wrote:
>>>> On Fri, Oct 4, 2013 at 2:09 PM, Eric Rasche <rasche.e...@yandex.ru> wrote:
>>>>> Yes, the code is definitely broken somewhere else, not in this function, 
>>>>> but
>>>>> this fix ensures that data is at least visible. However, data is right
>>>>> aligned as you mentioned, which is definitely undesirable.
>>>>
>>>> I would find this an improvement in the short term.
>>>>
>>>>> As for getting the script onto multiple lines, you are correct, you'd need
>>>>> to serve the uncompressed version.
>>>>
>>>> How do I do this?
>>>>
>>>>> Then again, I believe you're experiencing
>>>>> the same issue as me, because the compressed version of data.js uses
>>>>> column_types as 'j' and index as 'i'.
>>>>
>>>> I tried the fix by editing data.js but there was no change. If this
>>>> is the same bug, then maybe a cached (compressed?) copy of
>>>> data.js must still be in use.
>>>
>>> In the meantime to help ensure this does get fixed in the next
>>> stable release, I filed an issue on Trello:
>>>
>>> https://trello.com/c/it0oXXeT/1190-tabular-data-not-displaying-in-main-panel-data-js-error
>>>
>>> Peter
>>>
>> Wonderful! However, in upgrading to the latest galaxy-dist release (Oct.
>> 12), I saw my issue go away. Formatting is back and working. Is it the
>> same for you?
>>
>> Regards,
>> Eric
>>
>
> Hi Eric,
>
> Its still broken on our production instance, which is running what I thought
> was the galaxy-dist current release Aug 12, 2013 Galaxy Distribution
> http://wiki.galaxyproject.org/DevNewsBriefs
>
> $ hg head
> changeset:   10421:a477486bf18e
> branch:      stable
> tag:         tip
> user:        Nate Coraor <n...@bx.psu.edu>
> date:        Thu Sep 26 11:02:58 2013 -0400
> summary:     Bugfix for tool-to-destination mapping, tool ids are
> lowercased but the mapping id was not lowercased.
>
> changeset:   10411:c42567f43aa7
> user:        greg
> date:        Mon Aug 19 13:19:56 2013 -0400
> summary:     Filter invalid objects when generating the list of
> repository_dependencies objects that are associated with a tool shed
> repository installed into Galaxy.
>
> [galaxy@ppserver galaxy-dist]$ hg branch
> default
>
> Looking at https://bitbucket.org/galaxy/galaxy-dist/commits/all the
> latest commits are in September, so where did your Oct 12
> release you are running come from?
>
> (I know this has been fixed on galaxy-central although I don't
> know which commit was important or when it happened.)
>
> Peter

Has anyone else tried this on the current next-stable branch?
It seems to be working,

$ hg branch
next-stable

$ hg head | more
...
changeset:   12215:232ef8122d54
branch:      next-stable
parent:      12209:a00d08d23543
user:        Bjoern Gruening <bjoern.gruen...@gmail.com>
date:        Wed Oct 23 14:39:49 2013 +0200
summary:     cleanup & bugfix for R environment
...

Regards,

Peter
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