Hello Peter, On Feb 21, 2014, at 4:53 AM, Peter Cock <p.j.a.c...@googlemail.com> wrote:
> Hi guys, > > Yesterday I made a small tweak to the BLAST+ packages to fix a bash syntax > error in the fall back action: > > https://github.com/peterjc/galaxy_blast/commit/4b2fa1fbf485c4630cb6dc0beaf7286cb103bd71 > > > The BLAST+ 2.2.27 package seems to have no test results at all. The above issue was due to a bug that was introduced into the install and test framework late yesterday, causing the test to not run at all. The bug has been corrected in preparation for tonight's test run. The Test environment entry for the above repository was produced by the preparation script. > > However, the BLAST+ 2.2.28 package has this strange unicode error: > > Automated tool test results > > Test runs > 2014-02-20 12:48:52 > This repository > Error > 'unicode' object has no attribute 'get' > Error > 'unicode' object has no attribute 'get' > Error > 'unicode' object has no attribute 'get' > Error > 'unicode' object has no attribute 'get' > > > And similarly for BLAST+ 2.2.29, > > Automated tool test results > > Test runs > 2014-02-20 14:37:58 > This repository > Error > 'unicode' object has no attribute 'get' > Error > 'unicode' object has no attribute 'get' > Error > 'unicode' object has no attribute 'get' > Error > 'unicode' object has no attribute 'get' > > > This is puzzling, since the changes I made to the packages seemed innocuous - > making me wonder if something changed in the Test Tool Shed itself? The above 2 issues were the result of a bug in the Install and Test Framework that was exposed only with the changes you made to you repositories. The bug resulted in invalid information being included in the test results database column, and the "unicode object has not attribute get" error you're seeing above is due to the exception handling for displaying the invalid data in the Tool Shed repository's Test runs container. We've corrected the data in the database as well as the bug that produced it, so tonight's test run should not result in this behavior for these repositories. Thanks very much! Greg Von Kuster
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
