Hello List,
I'm writing a tool_dependencies.xml file for a python package.
It defines an action type="setup_virtualenv", and when I install it to
my galaxy from the test shed it is actually installed into
~/environments, and the tool definition is set up correctly.
This package includes a callable script, when I install the package on a
virtualenv using pip, the path to the CLI tool is inserted to the PATH
and I can call it anywhere.
But when I run the tool from galaxy it cannot find the script. Does the
setup_virtualenv action also update the PATH?
Thanks!
Rodrigo
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at:
http://galaxyproject.org/search/mailinglists/
