I tried upgrading a local galaxy test site to the stable or default codebases. Most of galaxy seemed to work fine - and I can start and stop it. But the local toolshed I had running under it seems now to be jammed in an error state:
Internal Server Error Galaxy was unable to successfully complete your request URL: http://..../toolshed/ Module galaxy.web.framework.middleware.error:149 in __call__ >> app_iter = self.application(environ, sr_checker) Module paste.debug.prints:106 in __call__ ... >> __M_writer(filters.html_escape(unicode(trans.app.shed_counter.unique_valid_tools ))) AttributeError: 'ShedCounter' object has no attribute 'unique_valid_tools' And there are a handful of admin tab links like 'Manage form definitions' that yield an error like: Error Traceback: View as: Interactive | Text | XML (full) ⇝ AttributeError: 'FormsGrid' object has no attribute 'use_hide_message' URL: http://salk.bccdc.med.ubc.ca/galaxylab/forms/browse_form_definitions Module weberror.evalexception.middleware:364 in respond view ... Though I can stop/start the main galaxy site, I can't seem to stop/start the local toolshed site? (I accidentally started galaxy (and probably the toolshed) in root in the past but I thought I'd recovered from that). Any tips would be appreciated! Regards, Damion ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
