-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 This is specifically to galaxy administrators and developers who have worked with galaxy and cluster deployment.
If you have successfully deployed a galaxy instance backed by one (or more) clusters, I'm looking to hear about your experience; - - the configuration - - any pitfalls encountered - - any extra tools that needed to be installed - - any ugly hacks you had to implement The current cluster documentation is somewhat lacking, and I'm willing to compile everyone's experiences deploying to clusters if you're willing to send them in. I'll update the cluster page on the wiki as I receive replies and can allocate time. By way of example, here's the summary of what I would reply to this email with my experiences deploying to an HTCondor cluster - - HTcondor ran fine, accepted jobs and worked for all users - - Connecting galaxy to it would result in some jobs running/some jobs failing. It was determined that those jobs which ran, were only on localhost. - - This was a result of the fact that galaxy's home directory/data was not exported - - Galaxy was made an LDAP user and a folder created in the correct location on all computers - - This still failed, as galaxy does not transfer files by default (as far as I can tell), even though that's available in HTCondor - - Finally galaxy's home directory was NFS exported and things seemed to work. Cheers, Eric - -- Eric Rasche Programmer II Center for Phage Technology Texas A&M University College Station, TX 77843 404-692-2048 e...@tamu.edu rasche.e...@yandex.ru -----BEGIN PGP SIGNATURE----- Version: GnuPG v2.0.17 (GNU/Linux) iQIcBAEBAgAGBQJThL4PAAoJEMqDXdrsMcpVJ0wP/jPFrTxRYnWcavbUxhht8tWE VDhid2pst7o+qkkLAUylPyNzJz31movsU1Gd2FJLP4+RHb3lhy2GWm8mR9G4JuMM g7fHAwIRj1qTT5tMXAEN6EoCtrValZH0EkIQPaFUPIiN1wzGTTDP56V+L6f3xQNg zglk2GTO+hM+AunYGuDugDvdKTPyKgR1K2vaCNdc2kZlvQZe7TlOHZEbXaoDGTY4 vwHcNR0+8fvf6Hs1liCuCuh8nlTBABZLxMl5LgxOaZqbaAVQWsqXNdh1tF/rlERL +PlNv5HRBWz26iGE04jbAD1pKmxg33Knl3l4MXrUnB5ZJ2dIDJL0YHOhXM3mjI4T Hf8mv/iVr21xx3zrrAbAlRIt3Npw4DtaGSqBFdKvnxQZygjKEF7ZKTGfA4xLNRHh 4dPElUpv8b3jUe2GqhXyrmHYuBdWqBC5Y/ii0k4c/bHjoXW6yg0mPs7po7i5+5JS wnO3mfoFhnyEALd45EBprkQY+kx05zjSg4ntpeywl8fIM2uGT0GyANA0/prKhcmB 5PiYUejsaDTY4GigiiZqz0tnC5z7VDyjByfyl7ufNaaCWNRXlTNIzH0ePy0ZjLrU Sj8XyI1XoOSdtyxxvNNe8OPDxxffnJxi0rres4Q3CC/EbZK4vBF7chsisHd28Q29 M1e+lNdO8FBIoy5+MR3H =6Jbk -----END PGP SIGNATURE----- ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
