You might be able to do this by accepting a collection of SAM/BAM files as input instead. This is a quite new feature in Galaxy, see:
https://wiki.galaxyproject.org/News/2014_06_02_Galaxy_Distribution Peter On Wed, Sep 3, 2014 at 10:00 AM, Philippe Moncuquet <[email protected]> wrote: > Hi, > > I am trying to write a wrapper for a tool that take a directory containing > SAM/BAM files as an input. I am not sure how to do that, is there another > tool that implements this and that I can have a look at ? Any suggestions > would be greatly appreciated. > > Regards, > Philip > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > http://lists.bx.psu.edu/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
